RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
PCDHGA11-201ENST00000398587 MMP7P09237 267 aaPredicted RBP12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 STARD4Q96DR4 205 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 IFT22Q9H7X7 185 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 IL36RNQ9UBH0 155 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF735P0CB33 412 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 NAT1P18440 290 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 SCNM1Q9BWG6 230 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 QTRT1Q9BXR0 403 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 RNF222A6NCQ9 220 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 NDUFB4O95168 129 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 SRP14P37108 136 aaKnown RBP12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 SGMS2Q8NHU3 365 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 SRD5A3Q9H8P0 318 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 TMEM106BQ9NUM4 274 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 FUT9Q9Y231 359 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 RND2P52198 227 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 NHLRC2Q8NBF2 726 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 DPF1Q92782 380 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 CLEC7AQ9BXN2 247 aa12.04□□□□□ -0.48
PCDHGA11-201ENST00000398587 TRBV6-7A0A0A0MS04 114 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 PROB1E7EW31 1015 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 GFRA1P56159 465 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 TRAV14DV4A0A0A6YYC5 116 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 DNASE2O00115 360 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 TM4SF5O14894 197 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 SIGLEC5O15389 551 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 LIPFP07098 398 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF146Q15072 292 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 SPRR3Q9UBC9 169 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 H0YL77 283 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 CCKARP32238 428 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 ARF6P62330 175 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 TNFRSF19Q9NS68 423 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 ID4P47928 161 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 HLA-DRB5Q30154 266 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 C5orf17Q8NAS9 161 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 OR5AU1Q8NGC0 362 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 PARD6AQ9NPB6 346 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 PITPNC1Q9UKF7 332 aa12.03□□□□□ -0.48
PCDHGA11-201ENST00000398587 MPTX1A8MV57 137 aa12.02□□□□□ -0.48
PCDHGA11-201ENST00000398587 FHITP49789 147 aa12.02□□□□□ -0.48
PCDHGA11-201ENST00000398587 RIGQ13278 110 aa12.02□□□□□ -0.48
PCDHGA11-201ENST00000398587 VKORC1L1Q8N0U8 176 aa12.02□□□□□ -0.48
PCDHGA11-201ENST00000398587 FAM87AP0C7U9 286 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 RPL39P5Q59GN2 51 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 VOPP1Q96AW1 172 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 RPRMQ9NS64 109 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 TMEM56-RWDD3S4R434 201 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 SNURFLB1AK76 121 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 FAM3BP58499 235 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 LY6G6FQ5SQ64 297 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 DNM1P46Q6ZS02 220 aa12.02□□□□□ -0.49
PCDHGA11-201ENST00000398587 A0A0A6YYD4 124 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 LDLRAD4O15165 306 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 Q0VFX4 171 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 PLPPR1Q8TBJ4 325 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 SMIM6P0DI80 62 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 SLC16A13Q7RTY0 426 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 FAM216BQ8N7L0 139 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 OSR1Q8TAX0 266 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 PKDREJQ9NTG1 2253 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 TANC1Q9C0D5 1861 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 KBTBD11-OT1A0A1B0GTJ5 212 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 C8orf88P0DMB2 117 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 FCER1GP30273 86 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 IER3P46695 156 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 BSPH1Q075Z2 132 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 MYO7BQ6PIF6 2116 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 C19orf24Q9BVV8 132 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 DNAJC4Q9NNZ3 241 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 DIDO1Q9BTC0 2240 aaKnown RBP12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 C17orf98A8MV24 154 aa12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 PTBP3O95758 552 aaKnown RBP12.01□□□□□ -0.49
PCDHGA11-201ENST00000398587 LOC105371242A0A075B767 164 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 NAGKQ9UJ70 344 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 PHF3Q92576 2039 aaKnown RBP12□□□□□ -0.49
PCDHGA11-201ENST00000398587 C17orf100A8MU93 164 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 MEF2CQ06413 473 aaPredicted RBP12□□□□□ -0.49
PCDHGA11-201ENST00000398587 FHL1Q13642 323 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 TMEM183BQ1AE95 376 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV1-12A0A0C4DH73 117 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 ISLRO14498 428 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 IGKV1D-12P01611 117 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 PLAURQ03405 335 aa12□□□□□ -0.49
PCDHGA11-201ENST00000398587 PACRGQ96M98 296 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms