RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 C4orf46Q504U0 113 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 LYG2Q86SG7 212 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 LHFPL5Q8TAF8 219 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 CHPT1Q8WUD6 406 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 TMEM56Q96MV1 263 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 DUX5Q96PT3 197 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 JMJD8Q96S16 334 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 TSNAXQ99598 290 aaKnown RBP15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 CHIAQ9BZP6 476 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 TMEM56-RWDD3S4R434 201 aa15.53■□□□□ 0.08
MAP1LC3A-203ENST00000397709 NBR2O15453 112 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 NDUFA3O95167 84 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 CDS2O95674 445 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 HRASP01112 189 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 NQO2P16083 231 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 PSG5Q15238 335 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 MMDQ15546 238 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 POU2AF1Q16633 256 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 TRIM16LQ309B1 348 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 MINDY2Q8NBR6 621 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 OR52B4Q8NGK2 314 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 PRR13Q9NZ81 148 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 C1RLQ9NZP8 487 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 MOB4Q9Y3A3 225 aa15.52■□□□□ 0.08
MAP1LC3A-203ENST00000397709 TCF21O43680 179 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 PRAF2O60831 178 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 CRYGBP07316 175 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 UBE2KP61086 200 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SRPXP78539 464 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 ANKRD55Q3KP44 614 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SELENOHQ8IZQ5 122 aaKnown RBP15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 CASTOR1Q8WTX7 329 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 IL22RA2Q969J5 263 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 R3HDM4Q96D70 268 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SEC22CQ9BRL7 303 aa15.51■□□□□ 0.07
MAP1LC3A-203ENST00000397709 RRHO14718 337 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 FGF16O43320 207 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 DUS4LO95620 317 aaKnown RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 DHFRP00374 187 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 RNASE1P07998 156 aaKnown RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SAA1P0DJI8 122 aaPredicted RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 UBA52P62987 128 aaKnown RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 VMA21Q3ZAQ7 101 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 VKORC1L1Q8N0U8 176 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 LGI3Q8N145 548 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 FAM71E2Q8N5Q1 922 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 LRTM2Q8N967 370 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 Q8N9W7 124 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 ZNF431Q8TF32 576 aaPredicted RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 RBPMSQ93062 196 aaKnown RBP15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SEC22AQ96IW7 307 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 RHOVQ96L33 236 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 AIFM2Q9BRQ8 373 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 RAB18Q9NP72 206 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 KIAA1456Q9P272 454 aa15.5■□□□□ 0.07
MAP1LC3A-203ENST00000397709 MARCH11A6NNE9 402 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 NCBP2LA6PVI3 153 aaKnown RBP15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SLC25A17O43808 307 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 GPR137BO60478 399 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 AMY1AP04745 511 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 C5orf64Q2M2E5 130 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 TMEM268Q5VZI3 342 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 ZNF695Q8IW36 515 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 PUSL1Q8N0Z8 303 aaKnown RBP15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 CADM3Q8N126 398 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 C5orf56Q8N8D9 126 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 TEX45Q8NA69 505 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 MITD1Q8WV92 249 aa15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 METTL1Q9UBP6 276 aaKnown RBP15.49■□□□□ 0.07
MAP1LC3A-203ENST00000397709 NIPBLQ6KC79 2804 aaeCLIP15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 A0A0B4J293 547 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 A0A0B4J2A0 478 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 M0QZK8 103 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 ATG12O94817 140 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 KRASP01116 189 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 IGKV1-5P01602 117 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 IL6RP08887 468 aaPredicted RBP15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 P0C879 139 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 G6PCP35575 357 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 ERVK-16P61578 105 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 OR4A47Q6IF82 309 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SSX9Q7RTT3 188 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 DMBX1Q8NFW5 382 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 COQ8AQ8NI60 647 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 FBXL15Q9H469 300 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 TPSG1Q9NRR2 321 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 TMEM140Q9NV12 185 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 BET1LQ9NYM9 111 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SHPKQ9UHJ6 478 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SIGLEC9Q9Y336 463 aa15.48■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SNRPGP15A8MWD9 76 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 OR2A4O95047 310 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 TATDN3Q17R31 274 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 SLC35G3Q8N808 338 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 VSTM2AQ8TAG5 236 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 OR2A7Q96R45 310 aa15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 GPN1Q9HCN4 374 aaPredicted RBP15.47■□□□□ 0.07
MAP1LC3A-203ENST00000397709 PIGBOS1A0A0B4J2F0 54 aa15.46■□□□□ 0.07
MAP1LC3A-203ENST00000397709 DUXBA0A1W2PPF3 345 aa15.46■□□□□ 0.07
MAP1LC3A-203ENST00000397709 C7orf66A4D0T2 115 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms