RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TM4SF20Q53R12 229 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 TCTEX1D4Q5JR98 221 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 DOLPP1Q86YN1 238 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 MOB1AQ9H8S9 216 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 SCRT2Q9NQ03 307 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 MBNL3Q9NUK0 354 aaKnown RBP10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 IL36GQ9NZH8 169 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 A0A1W2PRU2 124 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 PSMB11A5LHX3 300 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 HSPB6O14558 160 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 CRYBB3P26998 211 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 MFAP5Q13361 173 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM249Q2WGJ8 235 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 SH2D6Q7Z4S9 175 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 TMEM251Q8N6I4 163 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 ABHD14BQ96IU4 210 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 RNF208Q9H0X6 261 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 ZNF442Q9H7R0 627 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 HES4Q9HCC6 221 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 ATP23Q9Y6H3 246 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 B5MCH6 92 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 IGHG1P01857 330 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 COX5AP20674 150 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 RPS12P25398 132 aaKnown RBP10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 ID1P41134 155 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 VWC2Q2TAL6 325 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 CARD17Q5XLA6 110 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 C2orf91Q6ZV80 131 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
SLC28A1-203ENST00000394573 CD300LBA8K4G0 201 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 INSL3P51460 131 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 GPM6AP51674 278 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 RPS15AP62244 130 aaKnown RBP10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 OR5A2Q8NGI9 324 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 VSTM2AQ8TAG5 236 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 LYZL4Q96KX0 146 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 IL23AQ9NPF7 189 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 C19orf25Q9UFG5 118 aaPredicted RBP10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 V9GYV3 84 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 F5H5K5 113 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 LIPFP07098 398 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 SHISA6Q6ZSJ9 500 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 DEPPQ9NTK1 212 aa10.53□□□□□ -0.72
SLC28A1-203ENST00000394573 ANKRD30BLA7E2S9 258 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 J3KRW8 73 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 CGAP01215 116 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 SCTP09683 121 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 SMIM10L1P0DMW3 83 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 CD24P25063 80 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 PLCXD2Q0VAA5 305 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 INO80CQ6PI98 192 aaPredicted RBP10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 LHFPL2Q6ZUX7 228 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 BPIFA4PQ86YQ2 179 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 CA13Q8N1Q1 262 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 SMIM10Q96HG1 83 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 TNFRSF19Q9NS68 423 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 H0YGG7 62 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 H3BMH7 237 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 UTS2O95399 124 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 EDDM3BP56851 147 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 RPL31P62899 125 aaKnown RBP10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 WFDC2Q14508 124 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 DEFB110Q30KQ9 67 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 HNRNPA1L2Q32P51 320 aaKnown RBP10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 LY6G5CQ5SRR4 150 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 FAM69BQ5VUD6 431 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 DOK3Q7L591 496 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 PTRH2Q9Y3E5 179 aaKnown RBP10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 DYSFO75923 2080 aa10.52□□□□□ -0.73
SLC28A1-203ENST00000394573 SCN10AQ9Y5Y9 1956 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 TRBV9A0A0B4J1U6 114 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 A0A1W2PPM0 123 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SHISA8B8ZZ34 492 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 CRYGCP07315 174 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SLC35E2P0CK97 266 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 CX3CL1P78423 397 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 FUT7Q11130 342 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 ANXA2RQ3ZCQ2 193 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SPINK9Q5DT21 86 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 KCNIP2Q9NS61 270 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 EML2O95834 649 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 CFHR2P36980 270 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 OOSP2Q86WS3 158 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 MRPL43Q8N983 215 aaKnown RBP10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SPAG8Q99932 426 aaPredicted RBP10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 SSBP3Q9BWW4 388 aaPredicted RBP10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 OR2D2Q9H210 308 aa10.51□□□□□ -0.73
SLC28A1-203ENST00000394573 TMED7-TICAM2A0A0A6YYA0 188 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 H3BRM9 83 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 OR7C1O76099 320 aaPredicted RBP10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 MT-ND6P03923 174 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 CA3P07451 260 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 ARL14EPLP0DKL9 152 aa10.5□□□□□ -0.73
SLC28A1-203ENST00000394573 ETDBQ3ZM63 59 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms