RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 CXorf51AA0A1B0GTR3 108 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 DUX1O43812 170 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 CER1O95813 267 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 CRYBB3P26998 211 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 TCTEX1D4Q5JR98 221 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF562Q6V9R5 426 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 GAPTQ8N292 157 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 OR8A1Q8NGG7 326 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 GATAD1Q8WUU5 269 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 VWCEQ96DN2 955 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 SIGLEC12Q96PQ1 595 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 NPFFR1Q9GZQ6 430 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 HEATR5BQ9P2D3 2071 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 K7EQS6 105 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 TUSC2O75896 110 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF121P58317 390 aaPredicted RBP6.52□□□□□ -1.37
VTI1A-201ENST00000393077 RNFT1Q5M7Z0 435 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 FAM69BQ5VUD6 431 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 ANKRD37Q7Z713 158 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 OR4A16Q8NH70 328 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 PPP1R35Q8TAP8 253 aa6.52□□□□□ -1.37
VTI1A-201ENST00000393077 MGAMO43451 1857 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 F2Z2F3 143 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 C3orf80F5H4A9 247 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 MT-ATP6P00846 226 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 IGFBP3P17936 291 aaPredicted RBP6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ATP5G3P48201 142 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 TFF2Q03403 129 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 PLAURQ03405 335 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 C5orf64Q2M2E5 130 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 NHLRC2Q8NBF2 726 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 TSKUQ8WUA8 353 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 FER1L6-AS2Q96M78 137 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 MS4A6AQ9H2W1 248 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 MED29Q9NX70 200 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ASXL3Q9C0F0 2248 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 H3BVH4 76 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ETV2O00321 342 aaPredicted RBP6.51□□□□□ -1.37
VTI1A-201ENST00000393077 EMP1P54849 157 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 FOXF1Q12946 379 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE2BQ13066 116 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ODF1Q14990 250 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE13Q4V321 117 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ZAR1Q86SH2 424 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 TPRX1Q8N7U7 411 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 SPSB4Q96A44 273 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 HES4Q9HCC6 221 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 LRRC37A2A6NM11 1700 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 TPRP12270 2363 aaKnown RBP6.51□□□□□ -1.37
VTI1A-201ENST00000393077 CEACAM18A8MTB9 384 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 OR11H12B2RN74 326 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 NKX2-8O15522 239 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
VTI1A-201ENST00000393077 ASAH2BP0C7U1 165 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 TIMP3P35625 211 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 PDCD1Q15116 288 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 LRRC75BQ2VPJ9 315 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 PLXDC1Q8IUK5 500 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 OR11H1Q8NG94 326 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 OR11H2Q8NH07 326 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 CACNG8Q8WXS5 425 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 REPIN1Q9BWE0 567 aaKnown RBP6.51□□□□□ -1.37
VTI1A-201ENST00000393077 PRRG4Q9BZD6 226 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 SIT1Q9Y3P8 196 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 SIP14410 1827 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 RALGAPA2Q2PPJ7 1873 aa6.51□□□□□ -1.37
VTI1A-201ENST00000393077 FREM3P0C091 2139 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 RER1O15258 196 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SPRY1O43609 319 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SCGB1C2P0DMR2 95 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 KIR2DL1P43626 348 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 TNXAQ16473 311 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 IBA57Q5T440 356 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 CDCP2Q5VXM1 449 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 C18orf12Q96KH6 178 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 EMC6Q9BV81 110 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 PNRC2Q9NPJ4 139 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 CEP250Q9BV73 2442 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 KIAA2026Q5HYC2 2103 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 NYNRINQ9P2P1 1898 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 H0Y980 276 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SIVA1O15304 175 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 ENSAO43768 121 aaKnown RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 CYB561P49447 251 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 CLDN17P56750 224 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 RAC3P60763 192 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 MYBPHQ13203 477 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 ZNF418Q8TF45 676 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SPTSSAQ969W0 71 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GALMQ96C23 342 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 EAF1Q96JC9 268 aaPredicted RBP6.5□□□□□ -1.37
VTI1A-201ENST00000393077 SLC7A10Q9NS82 523 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE12JA6NER3 117 aa6.5□□□□□ -1.37
VTI1A-201ENST00000393077 GAGE7O76087 117 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms