RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 PRO3102Q9H379 93 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 DLL3Q9NYJ7 618 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 TRBV9A0A0B4J1U6 114 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 DKK1O94907 266 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 MRPS21P82921 87 aaKnown RBP12.54□□□□□ -0.4
CTNS-202ENST00000381870 OCIAD2Q56VL3 154 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 C1QTNF5Q9BXJ0 243 aa12.54□□□□□ -0.4
CTNS-202ENST00000381870 A0A1W2PRS3 328 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 ZIC3O60481 467 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 PSG1P11464 419 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 TCL1AP56279 114 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 RPL30P62888 115 aaKnown RBP12.53□□□□□ -0.4
CTNS-202ENST00000381870 RELBQ01201 579 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 HYAL1Q12794 435 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 IGFBP7Q16270 282 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 TMEM249Q2WGJ8 235 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 CEACAM21Q3KPI0 293 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 DCAF12Q5T6F0 453 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 VASH2Q86V25 355 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 CPT1CQ8TCG5 803 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.53□□□□□ -0.4
CTNS-202ENST00000381870 LOC102724200A0A096LPH7 203 aaPredicted RBP12.53□□□□□ -0.4
CTNS-202ENST00000381870 BMPR1BO00238 502 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 MUC15Q8N387 334 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 C19orf25Q9UFG5 118 aaPredicted RBP12.53□□□□□ -0.4
CTNS-202ENST00000381870 WDR83OSQ9Y284 106 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 SDK2Q58EX2 2172 aa12.53□□□□□ -0.4
CTNS-202ENST00000381870 OR5B21A6NL26 309 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 NPIPB11E5RHQ5 1161 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 RBMXL2O75526 392 aaKnown RBP12.52□□□□□ -0.4
CTNS-202ENST00000381870 P0C879 139 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 IGLL1P15814 213 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 CD1BP29016 333 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 RPL19P84098 196 aaKnown RBP12.52□□□□□ -0.4
CTNS-202ENST00000381870 FAM53AQ6NSI3 398 aaPredicted RBP12.52□□□□□ -0.4
CTNS-202ENST00000381870 OR5B3Q8NH48 314 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 EAF1Q96JC9 268 aaPredicted RBP12.52□□□□□ -0.4
CTNS-202ENST00000381870 DEFB126Q9BYW3 111 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 CSTL1Q9H114 145 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 CD207Q9UJ71 328 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 CDC42EP3Q9UKI2 254 aa12.52□□□□□ -0.4
CTNS-202ENST00000381870 IGHV3-9P01782 118 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 STAG3L2P0CL84 134 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 STAG3L3P0CL85 134 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 SRD5A2P31213 254 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 GTF3C1Q12789 2109 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
CTNS-202ENST00000381870 OR2D2Q9H210 308 aa12.52□□□□□ -0.41
CTNS-202ENST00000381870 IGLV3-12A0A075B6K2 115 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 CELA2AP08217 269 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 ARG2P78540 354 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 FXYD3Q14802 87 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 Q56UQ5 140 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 C19orf35Q6ZS72 473 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 NEUROG1Q92886 237 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 RNASE7Q9H1E1 156 aaKnown RBP12.51□□□□□ -0.41
CTNS-202ENST00000381870 CABIN1Q9Y6J0 2220 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 ZNF891A8MT65 544 aaPredicted RBP12.51□□□□□ -0.41
CTNS-202ENST00000381870 REG1AP05451 166 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 CX3CL1P78423 397 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 RHOGP84095 191 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 MRPL54Q6P161 138 aaKnown RBP12.51□□□□□ -0.41
CTNS-202ENST00000381870 PNKDQ8N490 385 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 ST6GALNAC6Q969X2 333 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 C5orf30Q96GV9 206 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 TXNDC17Q9BRA2 123 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 PRDM14Q9GZV8 571 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 CLEC1BQ9P126 229 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
CTNS-202ENST00000381870 WDR87Q6ZQQ6 2873 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 TRAV9-2A0A087WT02 112 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 CXorf1O96002 111 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 MT-ND6P03923 174 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 CCL3P10147 92 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 GLB1P16278 677 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 MIC13Q5XKP0 118 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 WDR73Q6P4I2 378 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 FAM58AQ8N1B3 248 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 MMP17Q9ULZ9 603 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 RHBDL1O75783 438 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 CA6P23280 308 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 BRWD1-AS2P59051 145 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 PCBD1P61457 104 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 PMCHL1Q16048 86 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 MPV17L2Q567V2 206 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 EBLN2Q6P2I7 272 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 COLCA1Q6ZS62 124 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 DOLPP1Q86YN1 238 aa12.5□□□□□ -0.41
CTNS-202ENST00000381870 USF3Q68DE3 2245 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 C17orf98A8MV24 154 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 TAX1BP3O14907 124 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 DUX1O43812 170 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 LIFP15018 202 aa12.49□□□□□ -0.41
CTNS-202ENST00000381870 TMEM11P17152 192 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms