RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 LPAR6P43657 344 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 TCTEX1D4Q5JR98 221 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SLC25A48Q6ZT89 311 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ADAD2Q8NCV1 583 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 WIPF2Q8TF74 440 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SPXQ9BT56 116 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CFHR5Q9BXR6 569 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF703Q9H7S9 590 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SOX8P57073 446 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RPL30P62888 115 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SRSF9Q13242 221 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CIARTQ8N365 385 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 OR1F12Q8NHA8 337 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PRSS3P2Q8NHM4 247 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 IL36BQ9NZH7 164 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 C1RLQ9NZP8 487 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 LIPGQ9Y5X9 500 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 IGHV1OR21-1A0A087WYE8 117 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RELBQ01201 579 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CLEC2AQ6UVW9 174 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PDPNQ86YL7 162 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 APCDD1LQ8NCL9 501 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SEC22AQ96IW7 307 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 LHX9Q9NQ69 397 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 J3KTA2 159 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 P01737 135 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SRP19P09132 144 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 VSIG10L2P0DP72 767 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 MEF2CQ06413 473 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PDE6HQ13956 83 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 MRPL13Q9BYD1 178 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF257Q9Y2Q1 563 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 FN1P02751 2386 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 A1L4Q6 167 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 C5orf49A4QMS7 147 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SNAI3Q3KNW1 292 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ANKRD34AQ69YU3 496 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ZFAND6Q6FIF0 208 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RNASEKQ6P5S7 137 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 TEPPQ6URK8 271 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RBPMS2Q6ZRY4 209 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 DRAM1Q8N682 238 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 OR8B12Q8NGG6 310 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ASB10Q8WXI3 467 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ERGIC1Q969X5 290 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 LPAR5Q9H1C0 372 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 WNT5BQ9H1J7 359 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 HSPB6O14558 160 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CA2P00918 260 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ACYP1P07311 99 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 MNX1P50219 401 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PSG9Q00887 426 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 WDR38Q5JTN6 314 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 Q6ZS92 163 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CCL4L1Q8NHW4 92 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SLC25A38Q96DW6 304 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PSG11Q9UQ72 335 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ABCA12Q86UK0 2595 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 CEP295Q9C0D2 2601 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 UBE2L5PA0A1B0GUS4 154 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 hADV38S2A0JD32 116 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 OR2H2O95918 312 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PPYP01298 95 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SRSF2Q01130 221 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 C19orf54Q5BKX5 351 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 FAM78BQ5VT40 261 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ANKRD37Q7Z713 158 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ATG4DQ86TL0 474 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF441Q8N8Z8 693 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 DUSP15Q9H1R2 295 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RNF167Q9H6Y7 350 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 FUT9Q9Y231 359 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 IFITM10A6NMD0 228 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 FFAR1O14842 300 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 PGFP49763 221 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 GNG10P50151 68 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RPS16P62249 146 aaKnown RBP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 TIAL1Q01085 375 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPRD-203ENST00000381196 RTP5Q14D33 572 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 TMEM215Q68D42 235 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 LCNL1Q6ZST4 164 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SFTPA2Q8IWL1 248 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SFTPA1Q8IWL2 248 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 SDF2L1Q9HCN8 221 aa4.23□□□□□ -1.73
PTPRD-203ENST00000381196 IZUMO1RA6ND01 250 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 C9orf172C9J069 976 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 B4GALT1P15291 398 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 RAC3P60763 192 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 KISS1Q15726 138 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 ZNF740Q8NDX6 193 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 YAE1D1Q9NRH1 226 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 TRGV10A0A0A0MS01 117 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 DSCR4P56555 118 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-203ENST00000381196 RUNX1Q01196 453 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 PMS2CLQ68D20 193 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 Q6ZPB1 254 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-203ENST00000381196 WBP2Q969T9 261 aa4.22□□□□□ -1.73
PTPRD-203ENST00000381196 ISG20L2Q9H9L3 353 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms