RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 HCFC1P51610 2035 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 MON2Q7Z3U7 1717 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 WNK2Q9Y3S1 2297 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 A0A0G2JLL6 359 aaPredicted RBP7.58□□□□□ -1.2
LIG3-202ENST00000378526 HLA-DQB1P01920 261 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 AZU1P20160 251 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 KIR3DS1Q14943 382 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 PRRT2Q7Z6L0 340 aaPredicted RBP7.58□□□□□ -1.2
LIG3-202ENST00000378526 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 VKORC1Q9BQB6 163 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 A0A1W2PR80 420 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 ZNF793Q6ZN11 406 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 TMUB1Q9BVT8 246 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 KCNE3Q9Y6H6 103 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 KNDC1Q76NI1 1749 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 ZNF146Q15072 292 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 SMIM8Q96KF7 97 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 INSIG2Q9Y5U4 225 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 MYOFQ9NZM1 2061 aa7.58□□□□□ -1.2
LIG3-202ENST00000378526 PTPRDP23468 1912 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 P2RY6Q15077 328 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 ASPHD2Q6ICH7 369 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 NPCDR1Q9BY65 106 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 RPP21Q9H633 154 aaKnown RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 NWD2Q9ULI1 1742 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 PLPP3O14495 311 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 LAMTOR5O43504 91 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 FAM159AQ6UWV7 190 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 SARAFQ96BY9 339 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 CLEC1BQ9P126 229 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 CRYBB3P26998 211 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 PPP1R27Q86WC6 154 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 CIARTQ8N365 385 aaPredicted RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 UBL5Q9BZL1 73 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 SPINT1O43278 529 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 SELLP14151 372 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 RUNX1Q01196 453 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 C1orf174Q8IYL3 243 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 SIRT5Q9NXA8 310 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 HIGD1CA8MV81 97 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 LSM6P62312 80 aaKnown RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 INSL4Q14641 139 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 SPEM1Q8N4L4 309 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 ARPC1AQ92747 370 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 INSM2Q96T92 566 aaPredicted RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 PPP1R3EQ9H7J1 279 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 MAST2Q6P0Q8 1798 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 C17orf47Q8NEP4 570 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 M0QZQ0 153 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 RAMP3O60896 148 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 TDGF1P3P51864 188 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 OR8B12Q8NGG6 310 aa7.57□□□□□ -1.2
LIG3-202ENST00000378526 CHTOPQ9Y3Y2 248 aaKnown RBP7.57□□□□□ -1.2
LIG3-202ENST00000378526 MOSP00540 346 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 GPX1P07203 203 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 RPL31P62899 125 aaKnown RBP7.56□□□□□ -1.2
LIG3-202ENST00000378526 BCL6BQ8N143 479 aaPredicted RBP7.56□□□□□ -1.2
LIG3-202ENST00000378526 SCN10AQ9Y5Y9 1956 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 DNAJC25-GNG10A0A024R161 153 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 HCRTO43612 131 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 DUSP2Q05923 314 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 DCAF12L2Q5VW00 463 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 OR11G2Q8NGC1 345 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 BAHD1Q8TBE0 780 aaPredicted RBP7.56□□□□□ -1.2
LIG3-202ENST00000378526 WNT2BQ93097 391 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 SPTBN2O15020 2390 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 PHIPQ8WWQ0 1821 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 PIK3C2BO00750 1634 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 RPL36A-HNRNPH2H7BZ11 118 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 VSIG10L2P0DP72 767 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 TNFAIP6P98066 277 aaPredicted RBP7.56□□□□□ -1.2
LIG3-202ENST00000378526 FDCSPQ8NFU4 85 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 FOXB1Q99853 325 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 LOXL2Q9Y4K0 774 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 SOCS3O14543 225 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 IL11P20809 199 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 EMDP50402 254 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 MESP2Q0VG99 397 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 NPIPB4C9JG80 1138 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 C1QL1O75973 258 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 FAM53BQ14153 422 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 DEFB133Q30KQ1 61 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 CCL28Q9NRJ3 127 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 PKDREJQ9NTG1 2253 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 MKRN2OSH3BPM6 223 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 NDUFS6O75380 124 aaKnown RBP7.56□□□□□ -1.2
LIG3-202ENST00000378526 TCTEX1D4Q5JR98 221 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 C1orf220Q5T0J3 134 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 C9orf40Q8IXQ3 194 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 CLDND2Q8NHS1 167 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 LRRC61Q9BV99 259 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 IL23AQ9NPF7 189 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
LIG3-202ENST00000378526 MGST3O14880 152 aa7.55□□□□□ -1.2
LIG3-202ENST00000378526 ADMP35318 185 aa7.55□□□□□ -1.2
LIG3-202ENST00000378526 SSTR5P35346 364 aa7.55□□□□□ -1.2
LIG3-202ENST00000378526 TMEM91Q6ZNR0 172 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms