RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 SHANK3Q9BYB0 1731 aa12.89□□□□□ -0.35
EXT1-201ENST00000378204 MGST3O14880 152 aa12.89□□□□□ -0.35
EXT1-201ENST00000378204 UCNP55089 124 aa12.89□□□□□ -0.35
EXT1-201ENST00000378204 TIMM23BQ5SRD1 257 aa12.89□□□□□ -0.35
EXT1-201ENST00000378204 DTX4Q9Y2E6 619 aa12.89□□□□□ -0.35
EXT1-201ENST00000378204 LOC389332A0A1B0GUA5 103 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 SS18L1O75177 396 aaPredicted RBP12.88□□□□□ -0.35
EXT1-201ENST00000378204 LINC00869P0C866 280 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 GZMMP51124 257 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 ZNF841Q6ZN19 808 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 PXMP4Q9Y6I8 212 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 SCNM1Q9BWG6 230 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 RBKSQ9H477 322 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 LY75O60449 1722 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 A0A1W2PQF6 199 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 H3BUT2 72 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 ZNF324O75467 553 aaPredicted RBP12.88□□□□□ -0.35
EXT1-201ENST00000378204 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 NACAE9PAV3 2078 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 A0A0J9YW62 118 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 ZNF137PP52743 207 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 ZNF645Q8N7E2 425 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 TMEM52Q8NDY8 209 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 AHRRA9YTQ3 701 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 CCL8P80075 99 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 TPTE2P1Q5T6R2 138 aa12.88□□□□□ -0.35
EXT1-201ENST00000378204 FNDC4Q9H6D8 234 aaPredicted RBP12.88□□□□□ -0.35
EXT1-201ENST00000378204 AURKAIP1Q9NWT8 199 aaPredicted RBP12.88□□□□□ -0.35
EXT1-201ENST00000378204 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 ISG15P05161 165 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 RCC1P18754 421 aaPredicted RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 PSG4Q00888 419 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 KRTCAP3Q53RY4 240 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 CLEC2AQ6UVW9 174 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 WFDC3Q8IUB2 231 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 ST6GALNAC3Q8NDV1 305 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 GTF3AQ92664 365 aaKnown RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 ZNF501Q96CX3 271 aaPredicted RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 METTL26Q96S19 204 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 SF3B6Q9Y3B4 125 aaKnown RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 RPL27AP46776 148 aaKnown RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 RALGAPA2Q2PPJ7 1873 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 S1PR2O95136 353 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 IGKV1D-16P01601 117 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 TCF23Q7RTU1 214 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 STPG3Q8N7X2 389 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 FAM106CPP0CH98 169 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 LGALS3P17931 250 aaKnown RBP12.87□□□□□ -0.35
EXT1-201ENST00000378204 IFITM3Q01628 133 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 FAM214BQ7L5A3 538 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 OR52E5Q8NH55 327 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 ABHD14BQ96IU4 210 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 GTSF1LQ9H1H1 148 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 SRIP30626 198 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 OR2K2Q8NGT1 345 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 SPANXCQ9NY87 97 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 SEC11AP67812 179 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
EXT1-201ENST00000378204 LOXL3P58215 753 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 NDUFS6O75380 124 aaKnown RBP12.86□□□□□ -0.35
EXT1-201ENST00000378204 LPAR2Q9HBW0 351 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 ZFP36L2P47974 494 aaKnown RBP12.86□□□□□ -0.35
EXT1-201ENST00000378204 TMPRSS3P57727 454 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 SHISA5Q8N114 240 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 TRAV8-4A0A0B4J246 113 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 A0A1W2PS18 150 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 TSPAN2O60636 221 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 WISP3O95389 354 aaPredicted RBP12.86□□□□□ -0.35
EXT1-201ENST00000378204 MPV17P39210 176 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 LCN2P80188 198 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 PRSS27Q9BQR3 290 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
EXT1-201ENST00000378204 LIMS1P48059 325 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 LCTP09848 1927 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 IGHV3-21A0A0B4J1V1 117 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 CENPVL1A0A0U1RR11 272 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 EBLN2Q6P2I7 272 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 DSPPQ9NZW4 1301 aa12.86□□□□□ -0.35
EXT1-201ENST00000378204 IGHV4-34P06331 123 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 GPR6P46095 362 aaPredicted RBP12.85□□□□□ -0.35
EXT1-201ENST00000378204 PRR33A8MZF0 331 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 PRSS2P07478 247 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 RPL8P62917 257 aaKnown RBP12.85□□□□□ -0.35
EXT1-201ENST00000378204 TM4SF20Q53R12 229 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
EXT1-201ENST00000378204 GCSAMQ8N6F7 178 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 TMEM222Q9H0R3 208 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
EXT1-201ENST00000378204 PATE3B3GLJ2 98 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 ZPLD1Q8TCW7 415 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 TUBD1Q9UJT1 453 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 MAS1LP35410 378 aa12.85□□□□□ -0.35
EXT1-201ENST00000378204 CISD1Q9NZ45 108 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms