RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TXNDC17Q9BRA2 123 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 C19orf24Q9BVV8 132 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 RFNGQ9Y644 331 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 C1QTNF9P0C862 333 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 CXorf66Q5JRM2 361 aaPredicted RBP10.08□□□□□ -0.8
NPHP4-202ENST00000378161 OR2M3Q8NG83 312 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 GNB1LQ9BYB4 327 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 RTN4RQ9BZR6 473 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 F11RQ9Y624 299 aaKnown RBP10.08□□□□□ -0.8
NPHP4-202ENST00000378161 RLFQ13129 1914 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 SCN3AQ9NY46 2000 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 A0A1B0GX78 115 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 A4D1N5 150 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 PCBD1P61457 104 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 SUPT4H1P63272 117 aaKnown RBP10.08□□□□□ -0.8
NPHP4-202ENST00000378161 OR1F12Q8NHA8 337 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 PNRC2Q9NPJ4 139 aaKnown RBP10.08□□□□□ -0.8
NPHP4-202ENST00000378161 ALKBH4Q9NXW9 302 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 ALPK2Q86TB3 2170 aa10.08□□□□□ -0.8
NPHP4-202ENST00000378161 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 IL9P15248 144 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 ATP5J2P56134 94 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 C6orf15Q6UXA7 325 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-202ENST00000378161 PBOV1Q9GZY1 135 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 CRIM1Q9NZV1 1036 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 FKBP2P26885 142 aaKnown RBP10.07□□□□□ -0.8
NPHP4-202ENST00000378161 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 MKXQ8IYA7 352 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 SYT8Q8NBV8 401 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 NYNRINQ9P2P1 1898 aaKnown RBP10.07□□□□□ -0.8
NPHP4-202ENST00000378161 A0A1W2PS18 150 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 TMEM187Q14656 261 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 ADIPOQQ15848 244 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 STPG1Q5TH74 334 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 C10orf126Q8N4M7 172 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 PIGTQ969N2 578 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 CABIN1Q9Y6J0 2220 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 A0A1W2PPM0 123 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 SYNGR2O43760 224 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 PIGCQ92535 297 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 GPX7Q96SL4 187 aaPredicted RBP10.07□□□□□ -0.8
NPHP4-202ENST00000378161 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
NPHP4-202ENST00000378161 IGKV1-8A0A0C4DH67 115 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 F8W1H4 67 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 F2RL2O00254 374 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 ZAR1Q86SH2 424 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 RBMXL3Q8N7X1 1067 aaKnown RBP10.06□□□□□ -0.8
NPHP4-202ENST00000378161 CENPVL1A0A0U1RR11 272 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 SPAARA0A1B0GVQ0 90 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 CSN3P07498 182 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 YPEL3P61236 119 aaPredicted RBP10.06□□□□□ -0.8
NPHP4-202ENST00000378161 ASCL4Q6XD76 172 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 VSTM2LQ96N03 204 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 GGTLC1Q9BX51 225 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 HEYLQ9NQ87 328 aaPredicted RBP10.06□□□□□ -0.8
NPHP4-202ENST00000378161 DOCK11Q5JSL3 2073 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 TRGV10A0A0A0MS01 117 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.06□□□□□ -0.8
NPHP4-202ENST00000378161 JPT1Q9UK76 154 aa10.06□□□□□ -0.8
NPHP4-202ENST00000378161 OR9G9P0C7N8 305 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 TMEM50BP56557 158 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 RPS4XP62701 263 aaKnown RBP10.05□□□□□ -0.8
NPHP4-202ENST00000378161 CATR1Q13166 79 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 INSIG2Q9Y5U4 225 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 LOC285556D6RIA3 1793 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 TRAV5A0A0B4J249 113 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 SRSF10O75494 262 aaKnown RBP10.05□□□□□ -0.8
NPHP4-202ENST00000378161 NGFRP08138 427 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 OR1D5P58170 312 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 ANXA2RQ3ZCQ2 193 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 CBLN3Q6UW01 205 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 OR8A1Q8NGG7 326 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 TAF15Q92804 592 aaKnown RBP eCLIP10.05□□□□□ -0.8
NPHP4-202ENST00000378161 APC2O95996 2303 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 TNFSF14O43557 240 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 PIGLQ9Y2B2 252 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 SCRG1O75711 98 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 CXorf1O96002 111 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 MGAT2Q10469 447 aa10.05□□□□□ -0.8
NPHP4-202ENST00000378161 CD27P26842 260 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 OR3A4PP47883 348 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 EDDM3BP56851 147 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 MYBPHQ13203 477 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 GPR82Q96P67 336 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 CACNA1IQ9P0X4 2223 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 SPTY2D1-AS1A0A0U1RR47 76 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 hADV38S2A0JD32 116 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 SUMO3P55854 103 aaPredicted RBP10.04□□□□□ -0.8
NPHP4-202ENST00000378161 RPL15P61313 204 aaKnown RBP10.04□□□□□ -0.8
NPHP4-202ENST00000378161 ERG28Q9UKR5 140 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 ATG2BQ96BY7 2078 aa10.04□□□□□ -0.8
NPHP4-202ENST00000378161 MYOFQ9NZM1 2061 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms