RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 IFITM10A6NMD0 228 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 FGF16O43320 207 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 PCOLCEQ15113 449 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 TMEM183AQ8IXX5 376 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 RCC1LQ96I51 464 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 SNRNP200O75643 2136 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 TNRC6BQ9UPQ9 1833 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 MARCH11A6NNE9 402 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 CELA2AP08217 269 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 SRP19P09132 144 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 COMPP49747 757 aaPredicted RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 RPL30P62888 115 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 Q1RN00 199 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 NRN1LQ496H8 165 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 C1QL2Q7Z5L3 287 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 JPT1Q9UK76 154 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 CEACAM18A8MTB9 384 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 NPBWR2P48146 333 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 MIC13Q5XKP0 118 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 C12orf54Q6X4T0 127 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 SNRNP40Q96DI7 357 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 RBM14Q96PK6 669 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 RNF126Q9BV68 326 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 SCNM1Q9BWG6 230 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 MRPL18Q9H0U6 180 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 ADAM11O75078 769 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 FREM3P0C091 2139 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 LINC00869P0C866 280 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 C8orf88P0DMB2 117 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 RPL27AP46776 148 aaKnown RBP7.17□□□□□ -1.26
VPS36-201ENST00000378060 LGALS7P47929 136 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 ATG101Q9BSB4 218 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 DDA1Q9BW61 102 aa7.17□□□□□ -1.26
VPS36-201ENST00000378060 HEATR5BQ9P2D3 2071 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 hCG_38984A0A1B0GV85 526 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 AHRRA9YTQ3 701 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 TGFBR3LH3BV60 316 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 CA7P43166 264 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 RPL24P83731 157 aaKnown RBP7.16□□□□□ -1.26
VPS36-201ENST00000378060 SLC25A53Q5H9E4 307 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 WDR25Q64LD2 544 aaPredicted RBP7.16□□□□□ -1.26
VPS36-201ENST00000378060 DRAM1Q8N682 238 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 TPRX1Q8N7U7 411 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 IL36RNQ9UBH0 155 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 HIGD1AQ9Y241 93 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 ZFP30Q9Y2G7 519 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 CACNA1EQ15878 2313 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 FRYQ5TBA9 3013 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 PPIAL4EA0A075B759 164 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 PPIAL4DF5H284 164 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 C16orf97H3BN30 126 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 CIDEAO60543 219 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 ZG16O60844 167 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 ORM1P02763 201 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 PPIAL4FP0DN26 164 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 WNT5AP41221 380 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 RPL8P62917 257 aaKnown RBP7.16□□□□□ -1.26
VPS36-201ENST00000378060 SPEM2Q0P670 501 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 OR8B3Q8NGG8 313 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 OR8B2Q96RD0 313 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 GP6Q9HCN6 339 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 SLC25A10Q9UBX3 287 aaPredicted RBP7.16□□□□□ -1.26
VPS36-201ENST00000378060 TCF19Q9Y242 345 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 PPIAL4AQ9Y536 164 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 C10orf142B7Z368 130 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 NPIPB7O75200 414 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 GOSR1O95249 250 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 STAG3L2P0CL84 134 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 COX6A1P12074 109 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 HOXA5P20719 270 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 SLC35E4Q6ICL7 350 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 DEFB124Q8NES8 71 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 SLC25A28Q96A46 364 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
VPS36-201ENST00000378060 ZNF430Q9H8G1 570 aaPredicted RBP7.16□□□□□ -1.26
VPS36-201ENST00000378060 ZNF729A6NN14 1252 aaPredicted RBP7.15□□□□□ -1.26
VPS36-201ENST00000378060 PRR33A8MZF0 331 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 DLL1O00548 723 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 ZNF735P0CB33 412 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 LRRC75BQ2VPJ9 315 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 CALHM1Q8IU99 346 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 FAM89BQ8N5H3 189 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 SAP25Q8TEE9 199 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 FAM216AQ8WUB2 273 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 GATAD1Q8WUU5 269 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 MRPL13Q9BYD1 178 aaKnown RBP7.15□□□□□ -1.26
VPS36-201ENST00000378060 DNAJC4Q9NNZ3 241 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 TMEM140Q9NV12 185 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 IGKV1D-43A0A0B4J1Z2 117 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 LOC101059948A0A1B0GTJ6 334 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 SNCGO76070 127 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 HERVK_113P61574 105 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 CCDC144NLQ6NUI1 221 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 GPHA2Q96T91 129 aa7.15□□□□□ -1.26
VPS36-201ENST00000378060 HES7Q9BYE0 225 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms