RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 GCSAMQ8N6F7 178 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 MMP16P51512 607 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 OR11H7Q8NGC8 314 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 FCGR2BP31994 310 aaPredicted RBP10.8□□□□□ -0.68
VPS13A-204ENST00000376634 HMGA2P52926 109 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 ARF6P62330 175 aa10.8□□□□□ -0.68
VPS13A-204ENST00000376634 TTTY12Q9BZ98 90 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 A0A1W2PQM1 296 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 TRAV30A0A087WSZ9 112 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 PQLC2Q6ZP29 291 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 HOGA1Q86XE5 327 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 MARS2Q96GW9 593 aaKnown RBP10.79□□□□□ -0.68
VPS13A-204ENST00000376634 MS4A3Q96HJ5 214 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 TMEM222Q9H0R3 208 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 H7C1H1 209 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 PLAUP00749 431 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 VN1R4Q7Z5H5 301 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 HDHD3Q9BSH5 251 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-204ENST00000376634 ATP5J2P56134 94 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 MMD2Q8IY49 270 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 OR5A1Q8NGJ0 315 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 CCL13Q99616 98 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 TNFSF18Q9UNG2 199 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 OR4C45A6NMZ5 311 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 MFAP4P55083 255 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 UNQ5815/PRO19632Q6UWF5 114 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 WFIKKN1Q96NZ8 548 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 PARLQ9H300 379 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 CFDP00746 253 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-204ENST00000376634 V9GYH0 126 aa10.79□□□□□ -0.68
VPS13A-204ENST00000376634 KLK13Q9UKR3 277 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 H3BRM9 83 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 OR10S1Q8NGN2 331 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 HIST1H1AQ02539 215 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-204ENST00000376634 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 CISD3P0C7P0 127 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF414Q96IQ9 312 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 DSCAMO60469 2012 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 ATXN7O15265 892 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-204ENST00000376634 CEACAM4O75871 244 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 TMEM250H0YL14 139 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 TRGC2P03986 189 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 SSTR5P35346 364 aa10.78□□□□□ -0.68
VPS13A-204ENST00000376634 MEF2CQ06413 473 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-204ENST00000376634 IGFBP6P24592 240 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-204ENST00000376634 THY1P04216 161 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 C1QL3Q5VWW1 255 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 C9orf40Q8IXQ3 194 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 FAM60AQ9NP50 221 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 TFF2Q03403 129 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 CD300CQ08708 224 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 MGAT2Q10469 447 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 ZNF324BQ6AW86 544 aaPredicted RBP10.77□□□□□ -0.68
VPS13A-204ENST00000376634 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 OVCH2Q7RTZ1 564 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.68
VPS13A-204ENST00000376634 MARCH11A6NNE9 402 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 MUC1P15941 1255 aaPredicted RBP10.77□□□□□ -0.69
VPS13A-204ENST00000376634 FLRT3Q9NZU0 649 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 HRKO00198 91 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 F12P00748 615 aaPredicted RBP10.77□□□□□ -0.69
VPS13A-204ENST00000376634 DNAJC4Q9NNZ3 241 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 KCNK7Q9Y2U2 307 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 ISXQ2M1V0 245 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 RARRES2Q99969 163 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 FOXJ2Q9P0K8 574 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 REG1AP05451 166 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 SNRPCP09234 159 aaKnown RBP10.77□□□□□ -0.69
VPS13A-204ENST00000376634 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 DNASE2BQ8WZ79 361 aa10.77□□□□□ -0.69
VPS13A-204ENST00000376634 PRRC2AP48634 2157 aaKnown RBP10.77□□□□□ -0.69
VPS13A-204ENST00000376634 A1L4Q6 167 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 RECKO95980 971 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 UNQ9370/PRO34162Q6UXP9 181 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 NRIP2Q9BQI9 281 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 MGST3O14880 152 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 RPS11P62280 158 aaKnown RBP eCLIP10.76□□□□□ -0.69
VPS13A-204ENST00000376634 OR51M1Q9H341 326 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 SRIP30626 198 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 OR51G1Q8NGK1 321 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 DUSP15Q9H1R2 295 aaPredicted RBP10.76□□□□□ -0.69
VPS13A-204ENST00000376634 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 PRR33A8MZF0 331 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 LIPFP07098 398 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 FGF12P61328 243 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 LINC00470Q9BZP3 86 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 SLC25A20O43772 301 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 BGLAPP02818 100 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 KLK2P20151 261 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 UCP2P55851 309 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 C19orf24Q9BVV8 132 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 KIAA1549LQ6ZVL6 1849 aa10.76□□□□□ -0.69
VPS13A-204ENST00000376634 NDUFA2O43678 99 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 HKR1P10072 659 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 ATOH7Q8N100 152 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 CCL27Q9Y4X3 112 aa10.75□□□□□ -0.69
VPS13A-204ENST00000376634 IGHV3-72A0A0B4J1Y9 119 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms