RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 B4E171 279 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 TSPAN7P41732 249 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 ZNF818PQ6ZRF7 136 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 C8orf46Q8TAG6 207 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 ARAP2Q8WZ64 1704 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 SNAI2O43623 268 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 CD24P25063 80 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 MRPL18Q9H0U6 180 aaKnown RBP12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 LGALS3P17931 250 aaKnown RBP12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 SRD5A1P18405 259 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 GZMMP51124 257 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 FAM106AQ4KMX7 169 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 LOXL4Q96JB6 756 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 PARLQ9H300 379 aa12.58□□□□□ -0.4
NOTCH4-201ENST00000375023 NPIPB6E9PJ23 425 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 PRR32B1ATL7 298 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 H0Y980 276 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 SPACA3Q8IXA5 215 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 NPIPB3Q92617 1050 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 PILRAQ9UKJ1 303 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 RRHO14718 337 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 TRGV3P03979 118 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 IL4P05112 153 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 SOD3P08294 240 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 HKR1P10072 659 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 TRBV5-3A0A0A0MS03 114 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 A0A0G2JMM0 328 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 A0A1W2PPB8 328 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 A0A1W2PRS3 328 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 KIR3DP1A8MWS1 328 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 RAMP1O60894 148 aa12.57□□□□□ -0.4
NOTCH4-201ENST00000375023 SLC25A47Q6Q0C1 308 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 ZNF430Q9H8G1 570 aaPredicted RBP12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 SCN8AQ9UQD0 1980 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 LRP5O75197 1615 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 P2RY4P51582 365 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 FAM74A3Q4VXF1 159 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 MARCH11A6NNE9 402 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 A8MWL6 223 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 ZP4Q12836 540 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 PCSK4Q6UW60 755 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 BIVMQ86UB2 503 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 ARHGEF17Q96PE2 2063 aaPredicted RBP12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 M0R381 172 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 NPFFO15130 113 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 LHX2P50458 406 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 KLF4O43474 513 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 IRF3Q14653 427 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 TMEM222Q9H0R3 208 aa12.56□□□□□ -0.4
NOTCH4-201ENST00000375023 CGB3P0DN86 165 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 MC5RP33032 325 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 P2RY6Q15077 328 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 MRPL13Q9BYD1 178 aaKnown RBP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 OR51M1Q9H341 326 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 HLA-DQB1P01920 261 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 RPL35AP18077 110 aaKnown RBP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 TAF15Q92804 592 aaKnown RBP eCLIP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 TMEM160Q9NX00 188 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 MARS2Q96GW9 593 aaKnown RBP12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 SRIP30626 198 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 LINC00305Q7Z4B0 112 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 FBXL15Q9H469 300 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 MAP1LC3AQ9H492 121 aa12.55□□□□□ -0.4
NOTCH4-201ENST00000375023 COL11A1P12107 1806 aaPredicted RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 IGKV1D-33P01593 117 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 IGKV1-33P01594 117 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 DDA1Q9BW61 102 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 DNAJC4Q9NNZ3 241 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 RECKO95980 971 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 ZCCHC24Q8N2G6 241 aaKnown RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 TRGV2A0A075B6R0 118 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 MMD2Q8IY49 270 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 CRIM1Q9NZV1 1036 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 SAP30O75446 220 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 NPPCP23582 126 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 H1FOOQ8IZA3 346 aaPredicted RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 TOMM7Q9P0U1 55 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 CXorf65A6NEN9 183 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 IFITM3Q01628 133 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 ZNF385CQ66K41 422 aaPredicted RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 DUX3Q96PT4 197 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 CLEC7AQ9BXN2 247 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 GEMIN7Q9H840 131 aaKnown RBP12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 FAM206AQ9NX38 181 aa12.54□□□□□ -0.4
NOTCH4-201ENST00000375023 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 FGF5P12034 268 aa12.53□□□□□ -0.4
NOTCH4-201ENST00000375023 LIMS1P48059 325 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms