RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ZNF645Q8N7E2 425 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 Q8N7P7 452 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 B4GALT7Q9UBV7 327 aa12.38□□□□□ -0.43
COL9A2-202ENST00000372748 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 C17orf112F2Z3M2 114 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 TMPRSS2O15393 492 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 ACP1P24666 158 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 TNFSF10P50591 281 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 TPTE2P1Q5T6R2 138 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 H2BFWTQ7Z2G1 175 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 SCCPDHQ8NBX0 429 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 PSPNO60542 156 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 YPEL1O60688 119 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 P0C879 139 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 CD99P14209 185 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 RAC2P15153 192 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 OCC1Q8TAD7 63 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 YPEL2Q96QA6 119 aa12.37□□□□□ -0.43
COL9A2-202ENST00000372748 A0A1W2PNU3 283 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-202ENST00000372748 ARL14EPLP0DKL9 152 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 TFPI2P48307 235 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 TGFBR3Q03167 851 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 ZNF90Q03938 601 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 PKIBQ9C010 78 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 MBNL3Q9NUK0 354 aaKnown RBP12.36□□□□□ -0.43
COL9A2-202ENST00000372748 IGHV3-43A0A0B4J1X8 118 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 IGHV3-43DP0DP04 118 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 CD1BP29016 333 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 TPPP2P59282 170 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 HLA-DRB5Q30154 266 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 MIEN1Q9BRT3 115 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 DMXL1Q9Y485 3027 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 DEFB108AA8MXU0 73 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 C12orf77C9JDV5 145 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 GRPP07492 148 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 CRISP2P16562 243 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 CXorf67Q86X51 503 aaPredicted RBP12.36□□□□□ -0.43
COL9A2-202ENST00000372748 TPRX1Q8N7U7 411 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 GALMQ96C23 342 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
COL9A2-202ENST00000372748 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 LPAR2Q9HBW0 351 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 KCNIP2Q9NS61 270 aa12.36□□□□□ -0.43
COL9A2-202ENST00000372748 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 BRS3P32247 399 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 TIMP3P35625 211 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 AESQ08117 197 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 ARSJQ5FYB0 599 aaPredicted RBP12.35□□□□□ -0.43
COL9A2-202ENST00000372748 BAGE3Q86Y29 109 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 BAGE2Q86Y30 109 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 QTRT1Q9BXR0 403 aaKnown RBP12.35□□□□□ -0.43
COL9A2-202ENST00000372748 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
COL9A2-202ENST00000372748 KCNIP1Q9NZI2 227 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 M0QZK8 103 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 TNFSF13O75888 250 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 SFTPCP11686 197 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 UBE2NP61088 152 aaKnown RBP12.35□□□□□ -0.43
COL9A2-202ENST00000372748 VWC2Q2TAL6 325 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 RFESDQ8TAC1 157 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 VAMP8Q9BV40 100 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 SAMD10Q9BYL1 202 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 DEFB127Q9H1M4 99 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 RNF114Q9Y508 228 aa12.35□□□□□ -0.43
COL9A2-202ENST00000372748 LINC00473A8K010 186 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 RRHO14718 337 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 SPINK4O60575 86 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 ARR3P36575 388 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 YPEL3P61236 119 aaPredicted RBP12.34□□□□□ -0.43
COL9A2-202ENST00000372748 CATR1Q13166 79 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 OR5I1Q13606 314 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 WIPI2Q9Y4P8 454 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 PPIAL4AQ9Y536 164 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 SH2D1BO14796 132 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 IER3P46695 156 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 KRTCAP3Q53RY4 240 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 MIC13Q5XKP0 118 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 TEX43Q6ZNM6 134 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 MRGPRDQ8TDS7 321 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 CIB3Q96Q77 187 aaPredicted RBP12.34□□□□□ -0.43
COL9A2-202ENST00000372748 SPRY4Q9C004 299 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 WDR83OSQ9Y284 106 aa12.34□□□□□ -0.43
COL9A2-202ENST00000372748 AQP7O14520 342 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 WNT9BO14905 357 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 CLDN14O95500 239 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 HBZP02008 142 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 LTC4SQ16873 150 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 TMEM183BQ1AE95 376 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 DMRTA1Q5VZB9 504 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 OR5AU1Q8NGC0 362 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 RTL8AQ9BWD3 113 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 OR2J1Q9GZK6 312 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 LOC400499M0QZD8 3231 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 COL27A1Q8IZC6 1860 aaPredicted RBP12.33□□□□□ -0.44
COL9A2-202ENST00000372748 FCN1O00602 326 aa12.33□□□□□ -0.44
COL9A2-202ENST00000372748 MEOX1P50221 254 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms