RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 S1PR2O95136 353 aa9.77□□□□□ -0.84
PTPRF-203ENST00000372407 FTH1P19P0C7X4 201 aa9.77□□□□□ -0.84
PTPRF-203ENST00000372407 CEBPDP49716 269 aaPredicted RBP9.77□□□□□ -0.84
PTPRF-203ENST00000372407 DRAM1Q8N682 238 aa9.77□□□□□ -0.84
PTPRF-203ENST00000372407 PRR7Q8TB68 274 aa9.77□□□□□ -0.84
PTPRF-203ENST00000372407 UBTD1Q9HAC8 227 aa9.77□□□□□ -0.84
PTPRF-203ENST00000372407 TGIF2-C20orf24A0A0A6YYL0 155 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 SLC25A17O43808 307 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 ZP1P60852 638 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 OR51G1Q8NGK1 321 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 FGF11Q92914 225 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 C19orf24Q9BVV8 132 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 MRPL18Q9H0U6 180 aaKnown RBP9.77□□□□□ -0.85
PTPRF-203ENST00000372407 CA7P43166 264 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 GLIPR1P48060 266 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 SRXN1Q9BYN0 137 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 IDI2-AS1Q9NZ38 188 aa9.77□□□□□ -0.85
PTPRF-203ENST00000372407 ADRA2AP08913 450 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 DDTP30046 118 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 NMUP48645 174 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ATP5IP56385 69 aaPredicted RBP9.76□□□□□ -0.85
PTPRF-203ENST00000372407 CDCP2Q5VXM1 449 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 C12orf54Q6X4T0 127 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 METTL1Q9UBP6 276 aaKnown RBP9.76□□□□□ -0.85
PTPRF-203ENST00000372407 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 MSGN1A6NI15 193 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 EIF3GO75821 320 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRF-203ENST00000372407 LINC00271P0C7V0 271 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM30BQ3MIR4 351 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ASPHD2Q6ICH7 369 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 SHISA5Q8N114 240 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 GATAD1Q8WUU5 269 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 LPAR2Q9HBW0 351 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 HILPDAQ9Y5L2 63 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 M0R3E3 92 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 TRGC1P0CF51 173 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 CKS2P33552 79 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 MAS1LP35410 378 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 SLC25A53Q5H9E4 307 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ABHD12Q8N2K0 398 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 UQCR10Q9UDW1 63 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 MED12Q93074 2177 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 IFNL4K9M1U5 179 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ZIC3O60481 467 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 RNF224P0DH78 156 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ARL14EPLP0DKL9 152 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 CRYBB3P26998 211 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 ID1P41134 155 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 C1QL2Q7Z5L3 287 aa9.76□□□□□ -0.85
PTPRF-203ENST00000372407 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 UCNP55089 124 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TGIF1Q15583 401 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF841Q6ZN19 808 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 STPG3Q8N7X2 389 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TCF21O43680 179 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 RAMP1O60894 148 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 CTSSP25774 331 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 LOXL3P58215 753 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 FAM209BQ5JX69 171 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 OR4C13Q8NGP0 309 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM54Q969K7 222 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 LINC00470Q9BZP3 86 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 CACNA1BQ00975 2339 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 CA2P00918 260 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TWIST1Q15672 202 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 DNM1P46Q6ZS02 220 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 RCC1LQ96I51 464 aaKnown RBP9.75□□□□□ -0.85
PTPRF-203ENST00000372407 NABP2Q9BQ15 211 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TM2D1Q9BX74 207 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 UCP1P25874 307 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM177Q53S58 311 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF506Q5JVG8 444 aa9.75□□□□□ -0.85
PTPRF-203ENST00000372407 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF729A6NN14 1252 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-203ENST00000372407 AREGP15514 252 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 OR9G1Q8NH87 305 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF502Q8TBZ5 544 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 TMEM74BQ9NUR3 256 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
PTPRF-203ENST00000372407 LCTP09848 1927 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 FBLL1A6NHQ2 334 aaKnown RBP9.74□□□□□ -0.85
PTPRF-203ENST00000372407 A8MXK9 166 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 TIAF1O95411 115 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 FAM106CPP0CH98 169 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 SRIP30626 198 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 ZNF362Q5T0B9 420 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-203ENST00000372407 MUC15Q8N387 334 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 A0A0B4J293 547 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 VENTXO95231 258 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 MFAP4P55083 255 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 FXYD3Q14802 87 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 KIAA1644Q3SXP7 199 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 SPATA45Q537H7 98 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 GP6Q9HCN6 339 aa9.74□□□□□ -0.85
PTPRF-203ENST00000372407 DIDO1Q9BTC0 2240 aaKnown RBP9.74□□□□□ -0.85
PTPRF-203ENST00000372407 hCG_38984A0A1B0GV85 526 aa9.73□□□□□ -0.85
PTPRF-203ENST00000372407 LINC00114Q6XXX2 140 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms