RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF525Q8N782 197 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 CLRN3Q8NCR9 226 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 RBMXL1Q96E39 390 aaKnown RBP11.62□□□□□ -0.55
LDB3-204ENST00000372066 SCRT1Q9BWW7 348 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 RBKSQ9H477 322 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 KIAA1456Q9P272 454 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 PRELID3BQ9Y3B1 194 aa11.62□□□□□ -0.55
LDB3-204ENST00000372066 USF3Q68DE3 2245 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 IGHV3-43A0A0B4J1X8 118 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.61□□□□□ -0.55
LDB3-204ENST00000372066 NKX6-3A6NJ46 265 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 H3BP45 60 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 KRASP01116 189 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 IGHV3-43DP0DP04 118 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 DUTP33316 252 aaKnown RBP11.61□□□□□ -0.55
LDB3-204ENST00000372066 G6PCP35575 357 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 EDDM3BP56851 147 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 LOXL3P58215 753 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 ZNF788Q6ZQV5 615 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 ZNRF1Q8ND25 227 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 RFESDQ8TAC1 157 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 CORO2AQ92828 525 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 LINC00574Q9H8X3 128 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 GFOD1Q9NXC2 390 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 TIMM9Q9Y5J7 89 aa11.61□□□□□ -0.55
LDB3-204ENST00000372066 NSD1Q96L73 2696 aaPredicted RBP11.61□□□□□ -0.55
LDB3-204ENST00000372066 TRAV1-1A0A0B4J248 108 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 DPRXA6NFQ7 191 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 LINC00473A8K010 186 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 C17orf100A8MU93 164 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 SIGLEC5O15389 551 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 PLAUP00749 431 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 LRRC75BQ2VPJ9 315 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 C1orf87Q8N0U7 546 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 OR10A7Q8NGE5 316 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 PINX1Q96BK5 328 aaKnown RBP11.6□□□□□ -0.55
LDB3-204ENST00000372066 ADTRPQ96IZ2 230 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 GAFA1Q96PS6 74 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 DCTN5Q9BTE1 182 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 EGLN1Q9GZT9 426 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 EIF5A2Q9GZV4 153 aaKnown RBP11.6□□□□□ -0.55
LDB3-204ENST00000372066 UNKLQ9H9P5 680 aaKnown RBP11.6□□□□□ -0.55
LDB3-204ENST00000372066 CLN8Q9UBY8 286 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 PRELID1Q9Y255 219 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 CSPG4Q6UVK1 2322 aa11.6□□□□□ -0.55
LDB3-204ENST00000372066 HIVEP2P31629 2446 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 CADP27708 2225 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 MARCH11A6NNE9 402 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 FHITP49789 147 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 ATP5J2P56134 94 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 BRWD1-AS2P59051 145 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 ERVK-16P61578 105 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 ADIPOQQ15848 244 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 FAM74A3Q4VXF1 159 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 SPANXN5Q5MJ07 72 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 R3HDM4Q96D70 268 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 PLPPR2Q96GM1 343 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 IFI27L2Q9H2X8 130 aa11.59□□□□□ -0.55
LDB3-204ENST00000372066 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 ATF4P18848 351 aaPredicted RBP11.58□□□□□ -0.55
LDB3-204ENST00000372066 PPT1P50897 306 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 RUNX1Q01196 453 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 BSPH1Q075Z2 132 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 C17orf58Q2M2W7 97 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 OR2B11Q5JQS5 317 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 SPSB3Q6PJ21 355 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 THNSL2Q86YJ6 484 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 OR52E5Q8NH55 327 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 DTD1Q8TEA8 209 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 TMEM147Q9BVK8 224 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 WDR61Q9GZS3 305 aaKnown RBP11.58□□□□□ -0.55
LDB3-204ENST00000372066 SLC35B3Q9H1N7 401 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 ESRP2Q9H6T0 727 aaKnown RBP11.58□□□□□ -0.55
LDB3-204ENST00000372066 IDI2-AS1Q9NZ38 188 aa11.58□□□□□ -0.55
LDB3-204ENST00000372066 M0R1X1 148 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 CYB5R3P00387 301 aaPredicted RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 OR4A8P0C604 315 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 PAX1P15863 534 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 THBS3P49746 956 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 RPP30P78346 268 aaKnown RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 MEF2CQ06413 473 aaPredicted RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 PDLIM3Q53GG5 364 aaPredicted RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 FAM53AQ6NSI3 398 aaPredicted RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
LDB3-204ENST00000372066 HAPLN4Q86UW8 402 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 CLCC1Q96S66 551 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 S1PR3Q99500 378 aa11.58□□□□□ -0.56
LDB3-204ENST00000372066 ROS1P08922 2347 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms