RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EIF2B1Q14232 305 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 DAZAP2Q15038 168 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 GUSBP1Q15486 140 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 OR7A5Q15622 319 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SLC25A35Q3KQZ1 300 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 DMKNQ6E0U4 476 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ARL9Q6T311 187 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 CEACAM19Q7Z692 300 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 LRRC25Q8N386 305 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 WDR31Q8NA23 367 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 DCAF4L2Q8NA75 395 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 OR13C6PQ8NH95 151 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SEC22AQ96IW7 307 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 PARLQ9H300 379 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 FAM206AQ9NX38 181 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 SIGLEC8Q9NYZ4 499 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 BOKQ9UMX3 212 aaPredicted RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 NOP16Q9Y3C1 178 aaKnown RBP4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ZFYVE26Q68DK2 2539 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 CEP295Q9C0D2 2601 aa4.25□□□□□ -1.73
UBE3D-202ENST00000369746 ASXL3Q9C0F0 2248 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 TRBV4-1A0A0J9YWV2 114 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 C15orf65H3BRN8 121 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 ZG16O60844 167 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 ATP5LO75964 103 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 C1orf105O95561 183 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 NRASP01111 189 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 GHRHP01286 108 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 CRYAAP02489 173 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 MAS1P04201 325 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 ACRV1P26436 265 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 RPL31P62899 125 aaKnown RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 IL15RAQ13261 267 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 DEFB109BQ30KR1 87 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 MS4A13Q5J8X5 152 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 OR52R1Q8NGF1 315 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 FGGYQ96C11 551 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 SDSLQ96GA7 329 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 Q96M66 194 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 FANCD2OSQ96PS1 177 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 RASL11BQ9BPW5 248 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 RNASE7Q9H1E1 156 aaKnown RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 SAP30LQ9HAJ7 183 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 KLK11Q9UBX7 282 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 LSM5Q9Y4Y9 91 aaKnown RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 SCN1AP35498 2009 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 SHANK1Q9Y566 2161 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 NAV2Q8IVL1 2488 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 LOC101059948A0A1B0GTJ6 334 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 OR4C45A6NMZ5 311 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 TRAPPC6AO75865 159 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 NDUFA7O95182 113 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 GDF5P43026 501 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 GUCA1AP43080 201 aaPredicted RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 TCTAP57738 103 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 GGTLC2Q14390 218 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF266Q14584 549 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 HLA-DRB5Q30154 266 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 SPATA45Q537H7 98 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 FAM162BQ5T6X4 162 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 RPS27LQ71UM5 84 aaKnown RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 C10orf111Q8N326 155 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 IQCF1Q8N6M8 205 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 ZIC4Q8N9L1 334 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 OR10G6Q8NH81 332 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 RND1Q92730 232 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 MRPL24Q96A35 216 aaKnown RBP4.24□□□□□ -1.73
UBE3D-202ENST00000369746 NDC1Q9BTX1 674 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 CMC2Q9NRP2 79 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 CISHQ9NSE2 258 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 TVP23BQ9NYZ1 205 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 MYO9AB2RTY4 2548 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 FBN2P35556 2912 aa4.24□□□□□ -1.73
UBE3D-202ENST00000369746 MYO18AQ92614 2054 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 A0A0A6YYD5 115 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 A6NDN8 102 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ZNF727A8MUV8 499 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 K7N7A8 449 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 M0R129 80 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 FGF10O15520 208 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 NPIPB7O75200 414 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 CD33P20138 364 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 KLK2P20151 261 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TACR1P25103 407 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 STC1P52823 247 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 PCBP3P57721 371 aaKnown RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SEC11AP67812 179 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 FAM27E3Q08E93 113 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 C1orf195Q5TG92 126 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 TMEM207Q6UWW9 146 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 OR4F17Q8NGA8 305 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 SGMS2Q8NHU3 365 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 CMTM2Q8TAZ6 248 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 RPS4Y2Q8TD47 263 aa4.23□□□□□ -1.73
UBE3D-202ENST00000369746 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.23□□□□□ -1.73
UBE3D-202ENST00000369746 WDYHV1Q96HA8 205 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms