RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 LDLRAD3Q86YD5 345 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR51G1Q8NGK1 321 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 SOX21Q9Y651 276 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 NCKAP5O14513 1909 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 S1PR2O95136 353 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 AREGP15514 252 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF506Q5JVG8 444 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR2I1PQ8NGU4 316 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 KLF14Q8TD94 323 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR4C12Q96R67 309 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 R4GN57 208 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 hCG_38984A0A1B0GV85 526 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 GLRXP35754 106 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 DNM1P46Q6ZS02 220 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 FADS6Q8N9I5 356 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 DMRT1Q9Y5R6 373 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 GPX4P36969 197 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 MS4A7Q9GZW8 240 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-203ENST00000366766 FAM90A9PA6NNJ1 464 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 SYNGR3O43761 229 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 SPINK4O60575 86 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 ID4P47928 161 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF880Q6PDB4 577 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 OSR1Q8TAX0 266 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 VWA1Q6PCB0 445 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 FAM222BQ8WU58 562 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 NAGKQ9UJ70 344 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 NDUFB4O95168 129 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 IL11P20809 199 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 HOXA4Q00056 320 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR9G1Q8NH87 305 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 HIST1H2BAQ96A08 127 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 ACAA1P09110 424 aaPredicted RBP10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 SCGB1D4Q6XE38 83 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 CACNG8Q8WXS5 425 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 RELBQ01201 579 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 TIMM23BQ5SRD1 257 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 PMCHL2Q9BQD1 86 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 THY1P04216 161 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 MRPL54Q6P161 138 aaKnown RBP10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF383Q8NA42 475 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 LRRC75AQ8NAA5 344 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMEM208Q9BTX3 173 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 IDI2-AS1Q9NZ38 188 aa10.3□□□□□ -0.76
CDC42BPA-203ENST00000366766 NAT1P18440 290 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 UNC119Q13432 240 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZCCHC14Q8WYQ9 949 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 CBY3A6NI87 242 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 WNT9BO14905 357 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 MED13Q9UHV7 2174 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 C2orf68Q2NKX9 166 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMEM78Q5T7P6 136 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 TCF24Q7RTU0 167 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 PRO1933Q9H354 126 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 DENND4AQ7Z401 1863 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 RUNX1Q01196 453 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 A0A1B0GTI1 187 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 Q6AWC8 147 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 CRIPAKQ8N1N5 446 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 RGP1Q92546 391 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 REPIN1Q9BWE0 567 aaKnown RBP10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 A0A1W2PP11 408 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 CHODLQ9H9P2 273 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMEM56-RWDD3S4R434 201 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 ARL14EPLP0DKL9 152 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 CXorf66Q5JRM2 361 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF703Q9H7S9 590 aaPredicted RBP10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 TCF19Q9Y242 345 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 TNFRSF19Q9NS68 423 aa10.29□□□□□ -0.76
CDC42BPA-203ENST00000366766 ELOVL1Q9BW60 279 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 B9A039 149 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TNFSF10P50591 281 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 COTL1Q14019 142 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 ZNF818PQ6ZRF7 136 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR52M1Q8NGK5 317 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 MRPL13Q9BYD1 178 aaKnown RBP10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 WDR87Q6ZQQ6 2873 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 PTPRQQ9UMZ3 2332 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TCL1AP56279 114 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 LPAR2Q9HBW0 351 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMEM171Q8WVE6 324 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 DPF1Q92782 380 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 HSPB7Q9UBY9 170 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 MALRD1Q5VYJ5 2156 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 KIR2DL2P43627 348 aaPredicted RBP10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMPRSS3P57727 454 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 SFRP2Q96HF1 295 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 FTH1P19P0C7X4 201 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 CYP2G1PQ6ZSU1 146 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 SYT8Q8NBV8 401 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 NPIPB7O75200 414 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 FOLR2P14207 255 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 TFF2Q03403 129 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
CDC42BPA-203ENST00000366766 EFNB1P98172 346 aa10.27□□□□□ -0.76
CDC42BPA-203ENST00000366766 PAM16Q9Y3D7 125 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms