RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 KRTAP4-6Q9BYQ5 205 aa10.33□□□□□ -0.76
VPS29-201ENST00000360579 LPAR5Q9H1C0 372 aa10.33□□□□□ -0.76
VPS29-201ENST00000360579 ZNF257Q9Y2Q1 563 aa10.33□□□□□ -0.76
VPS29-201ENST00000360579 DMRT1Q9Y5R6 373 aa10.33□□□□□ -0.76
VPS29-201ENST00000360579 DNAH6Q9C0G6 4158 aa10.33□□□□□ -0.76
VPS29-201ENST00000360579 ZNF320A2RRD8 509 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 MYL12BO14950 172 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 DIRAS3O95661 229 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 ARL3P36405 182 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 WNT4P56705 351 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 MRPS15P82914 257 aaKnown RBP10.32□□□□□ -0.76
VPS29-201ENST00000360579 ACSM3Q53FZ2 586 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 IDO2Q6ZQW0 420 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 RBPMS2Q6ZRY4 209 aaKnown RBP10.32□□□□□ -0.76
VPS29-201ENST00000360579 LRRTM1Q86UE6 522 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 MMD2Q8IY49 270 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 MS4A15Q8N5U1 240 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 UXS1Q8NBZ7 420 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 OR1L6Q8NGR2 347 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 OR10J5Q8NHC4 309 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 CACNG8Q8WXS5 425 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 MARC2Q969Z3 335 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 KCNK15Q9H427 330 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 ZNF430Q9H8G1 570 aaPredicted RBP10.32□□□□□ -0.76
VPS29-201ENST00000360579 SMPD3Q9NY59 655 aaPredicted RBP10.32□□□□□ -0.76
VPS29-201ENST00000360579 MLXQ9UH92 298 aa10.32□□□□□ -0.76
VPS29-201ENST00000360579 RBM7Q9Y580 266 aaKnown RBP10.32□□□□□ -0.76
VPS29-201ENST00000360579 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 TMEM213A2RRL7 107 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 ERICH4A6NGS2 130 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 BET1O15155 118 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 FABP7O15540 132 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
VPS29-201ENST00000360579 CRYZL1O95825 349 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 CDK10Q15131 360 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 DEFB135Q30KP9 77 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 SLC38A6Q8IZM9 456 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 SETD9Q8NE22 299 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 PHLDA1Q8WV24 401 aaPredicted RBP10.31□□□□□ -0.76
VPS29-201ENST00000360579 FBXL7Q9UJT9 491 aa10.31□□□□□ -0.76
VPS29-201ENST00000360579 TRBV6-7A0A0A0MS04 114 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 DPPA5A6NC42 116 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 FOXI3A8MTJ6 420 aaPredicted RBP10.3□□□□□ -0.76
VPS29-201ENST00000360579 DHFRP00374 187 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 GSTT2P0CG29 244 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 GSTT2BP0CG30 244 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 CD37P11049 281 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 DUTP33316 252 aaKnown RBP10.3□□□□□ -0.76
VPS29-201ENST00000360579 HSD17B12Q53GQ0 312 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 BTNL8Q6UX41 500 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 OR2C3Q8N628 320 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 STPG3Q8N7X2 389 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 OR56B1Q8NGI3 324 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 RNF183Q96D59 192 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 ARHGAP5-AS1Q96IT6 56 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 CABLES2Q9BTV7 478 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 CENPOQ9BU64 300 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 PECRQ9BY49 303 aa10.3□□□□□ -0.76
VPS29-201ENST00000360579 NPIPB5A8MRT5 1133 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 SAA1P0DJI8 122 aaPredicted RBP10.29□□□□□ -0.76
VPS29-201ENST00000360579 RANBP1P43487 201 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 TMEM50BP56557 158 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 INSL4Q14641 139 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 CLEC19AQ6UXS0 136 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 CEACAM19Q7Z692 300 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 PQLC1Q8N2U9 271 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 EEF1AKMT3Q96AZ1 226 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 SPAG8Q99932 426 aaPredicted RBP10.29□□□□□ -0.76
VPS29-201ENST00000360579 PLGRKTQ9HBL7 147 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 SELENOKQ9Y6D0 94 aa10.29□□□□□ -0.76
VPS29-201ENST00000360579 CDK1P06493 297 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 CD3GP09693 182 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 HIST1H1BP16401 226 aaKnown RBP10.28□□□□□ -0.76
VPS29-201ENST00000360579 GALP22466 123 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 MED22Q15528 200 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 IGSF11Q5DX21 431 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 VSTM2AQ8TAG5 236 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 CCDC140Q96MF4 163 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 GINS4Q9BRT9 223 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
VPS29-201ENST00000360579 MRPL27Q9P0M9 148 aaKnown RBP10.28□□□□□ -0.76
VPS29-201ENST00000360579 TRBV7-1A0A0A6YYK4 115 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 LINC00473A8K010 186 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 SLC17A2O00624 439 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 IGHV3-23P01764 117 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 C8orf88P0DMB2 117 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 MYOD1P15172 320 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
VPS29-201ENST00000360579 TCTAP57738 103 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 P2RY14Q15391 338 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 SSX1Q16384 188 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 C10orf55Q5SWW7 151 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 NANOGP1Q8N7R0 232 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 CYGBQ8WWM9 190 aa10.27□□□□□ -0.77
VPS29-201ENST00000360579 FYTTD1Q96QD9 318 aaKnown RBP10.27□□□□□ -0.77
VPS29-201ENST00000360579 MFFQ9GZY8 342 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms