RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 REPIN1Q9BWE0 567 aaKnown RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 C1QTNF5Q9BXJ0 243 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 C12orf49Q9H741 205 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF703Q9H7S9 590 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 CDC42EP3Q9UKI2 254 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 IGHV1-69-2A0A0G2JMI3 117 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 KIAA1324LA8MWY0 1029 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 HOXA4Q00056 320 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 LRRC75BQ2VPJ9 315 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM78BQ5VT40 261 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF324BQ6AW86 544 aaPredicted RBP6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 FGFRL1Q8N441 504 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TCTEX1D1Q8N7M0 179 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 SIGLECL1Q8N7X8 197 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR10G9Q8NGN4 311 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR10G7Q8NGN6 311 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 PLPPR2Q96GM1 343 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 TMEM204Q9BSN7 226 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 DEPPQ9NTK1 212 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 DLL3Q9NYJ7 618 aa6.95□□□□□ -1.3
CDC42SE1-201ENST00000357235 C1QTNF9BB2RNN3 333 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 RAMP3O60896 148 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 SERF1AO75920 110 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 CELA3AP09093 270 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PLP2Q04941 152 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 FFAR4Q5NUL3 377 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 ACSM6Q6P461 480 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PRSS57Q6UWY2 283 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 BAGE3Q86Y29 109 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 BAGE2Q86Y30 109 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR52L2PQ8NGH6 319 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PRDM14Q9GZV8 571 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 UBE2ZQ9H832 354 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 GAGE12BA1L429 117 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PINLYPA6NC86 204 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PGPEP1LA6NFU8 196 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 CXCL12P48061 93 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 CEBPDP49716 269 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 SERF2P84101 59 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 LTC4SQ16873 150 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 TMEM95Q3KNT9 176 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 LYSMD4Q5XG99 296 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 WDR73Q6P4I2 378 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 CXorf67Q86X51 503 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR2Y1Q8NGV0 311 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 MBD3L1Q8WWY6 194 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZDHHC16Q969W1 377 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 APOBEC3DQ96AK3 386 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM103A1Q9BTL3 118 aaKnown RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 PHF7Q9BWX1 381 aaPredicted RBP6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZDHHC11Q9H8X9 412 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 GTF3C1Q12789 2109 aa6.94□□□□□ -1.3
CDC42SE1-201ENST00000357235 LY6G6EA0A0G2JKS1 128 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 CD99P14209 185 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 CRISP2P16562 243 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ADMP35318 185 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 CYB561P49447 251 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 LINC00205P59089 165 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 HES7Q9BYE0 225 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 WDR54Q9H977 334 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 LIN7CQ9NUP9 197 aaKnown RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 CLEC5AQ9NY25 188 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 U3KQA8 63 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZDBF2Q9HCK1 2354 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 SVILO95425 2214 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 LOC102723996A0A087X1L8 192 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZNF891A8MT65 544 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 C22orf46C9J442 243 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 GYPAP02724 150 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 GRPP07492 148 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 DUSP3P51452 185 aaPredicted RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 PPP1CBP62140 327 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 TFF3Q07654 80 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 DRAM1Q8N682 238 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 SPSB4Q96A44 273 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FBXL7Q9UJT9 491 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 MAP1BP46821 2468 aaKnown RBP6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A18PA6NE21 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A16PA6NEW6 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A20PA6NIJ5 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A8PA6NJQ4 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A7PA6NKC0 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A22PA8MWA6 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A12PA8MX19 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A5PA8MXJ8 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A23PA8MXZ1 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 PATE3B3GLJ2 98 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 CDIPTO14735 213 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 OR7C2O60412 319 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 ZG16O60844 167 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 TFF1P04155 84 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A15PP0C7V4 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A13PP0C7W8 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A14PP0C7W9 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 FAM90A24PP0C7X0 464 aa6.93□□□□□ -1.3
CDC42SE1-201ENST00000357235 GNG3P63215 75 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms