RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZNF391Q9UJN7 358 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FER1L5A0AVI2 2057 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A10PA6NDY2 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A18PA6NE21 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A16PA6NEW6 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A20PA6NIJ5 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A8PA6NJQ4 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A7PA6NKC0 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 ZNF891A8MT65 544 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A22PA8MWA6 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A12PA8MX19 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A5PA8MXJ8 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A23PA8MXZ1 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CXCL13O43927 109 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 TOMM40O96008 361 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 APCSP02743 223 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A15PP0C7V4 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A13PP0C7W8 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A14PP0C7W9 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A24PP0C7X0 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 ESDP10768 282 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 USF1P22415 310 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 PSG7Q13046 419 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 DAZAP2Q15038 168 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 PMCHL1Q16048 86 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 LTC4SQ16873 150 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 PQLC2Q6ZP29 291 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 Q6ZS49 121 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 VASH2Q86V25 355 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 NIT1Q86X76 327 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 Q8N976 141 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 TSTD1Q8NFU3 115 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 NINJ1Q92982 152 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 DLL3Q9NYJ7 618 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CRIM1Q9NZV1 1036 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 MRPS16Q9Y3D3 137 aaKnown RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV1-69-2A0A0G2JMI3 117 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 A0A1W2PPC4 97 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 OR2T8A6NH00 312 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 K7EN84 100 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 LINC01565O15544 149 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CLDN14O95500 239 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CXorf1O96002 111 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 CATR1Q13166 79 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 TIGITQ495A1 244 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 Q6ZSR3 168 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 ZIC4Q8N9L1 334 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 NFAM1Q8NET5 270 aaPredicted RBP6.41□□□□□ -1.38
BRCA1-201ENST00000352993 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 SRXN1Q9BYN0 137 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 PLEKHA3Q9HB20 300 aa6.41□□□□□ -1.38
BRCA1-201ENST00000352993 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 TRAV24A0A0B4J272 114 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 A0A1W2PN81 502 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 MT-CO2P00403 227 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 CELA2AP08217 269 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 FKBP2P26885 142 aaKnown RBP6.4□□□□□ -1.38
BRCA1-201ENST00000352993 EPHA8P29322 1005 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-201ENST00000352993 TMEM240Q5SV17 173 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 SLC23A3Q6PIS1 610 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 C19orf35Q6ZS72 473 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 OR4P4Q8NGL7 312 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 OR2Y1Q8NGV0 311 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 PLPPR2Q96GM1 343 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 GNB1LQ9BYB4 327 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 STRADBQ9C0K7 418 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 KCNIP1Q9NZI2 227 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 YTHDF2Q9Y5A9 579 aaKnown RBP6.4□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV1OR21-1A0A087WYE8 117 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 HELTA6NFD8 242 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 ANKRD30BLA7E2S9 258 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 MT-ND6P03923 174 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 IGLL1P15814 213 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 MRPS21P82921 87 aaKnown RBP6.4□□□□□ -1.38
BRCA1-201ENST00000352993 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 EAF1Q96JC9 268 aaPredicted RBP6.4□□□□□ -1.38
BRCA1-201ENST00000352993 AP1S3Q96PC3 154 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 IL19Q9UHD0 177 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 CDC42EP3Q9UKI2 254 aa6.4□□□□□ -1.38
BRCA1-201ENST00000352993 IGHV2-26A0A0B4J1V2 119 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 HSBP1L1C9JCN9 74 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 M0R1X1 148 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 CA1P00915 261 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-201ENST00000352993 CRYBB3P26998 211 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 CAMPP49913 170 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 LINC00205P59089 165 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 HYAL1Q12794 435 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 ASPHD1Q5U4P2 390 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 NHLRC2Q8NBF2 726 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 OR5B3Q8NH48 314 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 SSBP3Q9BWW4 388 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-201ENST00000352993 HINT2Q9BX68 163 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 UBE2ZQ9H832 354 aaPredicted RBP6.4□□□□□ -1.39
BRCA1-201ENST00000352993 CLEC1BQ9P126 229 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 FREM1Q5H8C1 2179 aa6.4□□□□□ -1.39
BRCA1-201ENST00000352993 TRBV9A0A0B4J1U6 114 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 IGLC7A0M8Q6 106 aa6.39□□□□□ -1.39
BRCA1-201ENST00000352993 C17orf98A8MV24 154 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms