RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 RPS16P62249 146 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 HES1Q14469 280 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 SIGLECL1Q8N7X8 197 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 RBPMSQ93062 196 aaKnown RBP15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 R3HDM4Q96D70 268 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 HARBI1Q96MB7 349 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 PHB2Q99623 299 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 PRDM13Q9H4Q3 707 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 NAV3Q8IVL0 2385 aa15.2■□□□□ 0.02
CHMP4A-201ENST00000347519 CCSO14618 274 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 MOSP00540 346 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 KRASP01116 189 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 IGHV4-59P01825 116 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 P0C879 139 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 Q6YL49 198 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 SSX9Q7RTT3 188 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 THNSL2Q86YJ6 484 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 OR4C13Q8NGP0 309 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 OR2T10Q8NGZ9 312 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 OSR1Q8TAX0 266 aaPredicted RBP15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 IL22RA2Q969J5 263 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 COMMD9Q9P000 198 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 HIVEP2P31629 2446 aa15.19■□□□□ 0.02
CHMP4A-201ENST00000347519 MPTX1A8MV57 137 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 SSNA1O43805 119 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 TMEM11P17152 192 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 ARHGDIBP52566 201 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 SRPXP78539 464 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 FCN2Q15485 313 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 LY6EQ16553 131 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 GGNBP1Q5YKI7 109 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 TMEM219Q86XT9 240 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 CADM3Q8N126 398 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 ZDHHC16Q969W1 377 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 GPR146Q96CH1 333 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 TPSG1Q9NRR2 321 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 PLSCR3Q9NRY6 295 aa15.18■□□□□ 0.02
CHMP4A-201ENST00000347519 TRAV3A0A0B4J244 114 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 A6NDX4 124 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 MARCH11A6NNE9 402 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 SIX6O95475 246 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 FAM106CPP0CH98 169 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 SAA1P0DJI8 122 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 NQO2P16083 231 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 IER3P46695 156 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 PSG5Q15238 335 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 AANATQ16613 207 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 POU2AF1Q16633 256 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 Q6ZRM9 215 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 WDR89Q96FK6 387 aaPredicted RBP15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 RHOVQ96L33 236 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 CDC42EP3Q9UKI2 254 aa15.17■□□□□ 0.02
CHMP4A-201ENST00000347519 GOSR2O14653 212 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 CRYGBP07316 175 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 OR9G9P0C7N8 305 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 SRD5A1P18405 259 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 RRAS2P62070 204 aaPredicted RBP15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 MRGPRG-AS1Q2M3A8 158 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 NMSQ5H8A3 153 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 OR4A47Q6IF82 309 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 PUSL1Q8N0Z8 303 aaKnown RBP15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 OR11H7Q8NGC8 314 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 TNFRSF19Q9NS68 423 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 TMEM140Q9NV12 185 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 TCF19Q9Y242 345 aa15.16■□□□□ 0.02
CHMP4A-201ENST00000347519 FN1P02751 2386 aaKnown RBP15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 HOXA3O43365 443 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 SLC25A17O43808 307 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 HRASP01112 189 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 IL6RP08887 468 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 SULT1A3P0DMM9 295 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 SULT1A4P0DMN0 295 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 CXCL3P19876 107 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 LGALS7P47929 136 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 AKR1C2P52895 323 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 DMBX1Q8NFW5 382 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 OR10C1Q96KK4 312 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 RNF5Q99942 180 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 MED28Q9H204 178 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 FBXL15Q9H469 300 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 MGAT4CQ9UBM8 478 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 NSG2Q9Y328 171 aa15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 TET2Q6N021 2002 aaPredicted RBP15.15■□□□□ 0.02
CHMP4A-201ENST00000347519 DUXBA0A1W2PPF3 345 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 NDUFA3O95167 84 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 VDAC1P21796 283 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 UBE2KP61086 200 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 MMDQ15546 238 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 NPBQ8NG41 125 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 CHAC2Q8WUX2 184 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 LSM10Q969L4 123 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 TSNAXQ99598 290 aaKnown RBP15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 RAB18Q9NP72 206 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 MMP24Q9Y5R2 645 aa15.14■□□□□ 0.01
CHMP4A-201ENST00000347519 NBR2O15453 112 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 PLXNB1O43157 2135 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 CHST1O43916 411 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 MYOD1P15172 320 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 HLA-GP17693 338 aa15.13■□□□□ 0.01
CHMP4A-201ENST00000347519 ERVK-16P61578 105 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms