RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 DHRS11Q6UWP2 260 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 WDYHV1Q96HA8 205 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 MOB4Q9Y3A3 225 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 SPINK4O60575 86 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 LILRA1O75019 489 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 CECR9P0C854 216 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 Q1RN00 199 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF319Q9P2F9 582 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 HSF4Q9ULV5 492 aa9.26□□□□□ -0.93
CLCN6-202ENST00000346436 TM4SF5O14894 197 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 ERVFC1-1P60608 527 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
CLCN6-202ENST00000346436 RELBQ01201 579 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 AQP10Q96PS8 301 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 ATG101Q9BSB4 218 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 RSG1Q9BU20 258 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 CACNA1EQ15878 2313 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 FXYD3Q14802 87 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 COLCA1Q6ZS62 124 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 SAXO1Q8IYX7 474 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 PAQR4Q8N4S7 273 aaPredicted RBP9.25□□□□□ -0.93
CLCN6-202ENST00000346436 POC1AQ8NBT0 407 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 TMPRSS5Q9H3S3 457 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 A0A1W2PPE3 182 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
CLCN6-202ENST00000346436 SYNGR2O43760 224 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 HBZP02008 142 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 MGPP08493 103 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF735P0CB33 412 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF880Q6PDB4 577 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 LINC00518Q8N0U6 118 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 LINC01356Q8N9X3 169 aa9.25□□□□□ -0.93
CLCN6-202ENST00000346436 RTBDNQ9BSG5 229 aaPredicted RBP9.25□□□□□ -0.93
CLCN6-202ENST00000346436 IGSF23A1L1A6 192 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 WISP1O95388 367 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 SEC11BP0C7V7 166 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 MMP9P14780 707 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 SPCS3P61009 180 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 WDFY1Q8IWB7 410 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 A0A1B0GTI1 187 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 CLDN34H7C241 214 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 TPRX1Q8N7U7 411 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 SNURFLB1AK76 121 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 GNG4P50150 75 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF137PP52743 207 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 DNAH12Q6ZR08 3092 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 IGHV2OR16-5A0A0B4J2B6 119 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 H0YL77 283 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 TGOLN2O43493 480 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 OR2H2O95918 312 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 APELAP0DMC3 54 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 G6PCP35575 357 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 HERVK_113P61574 105 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 KHDC3LQ587J8 217 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 LRP11Q86VZ4 500 aa9.24□□□□□ -0.93
CLCN6-202ENST00000346436 EIF4E3Q8N5X7 224 aaKnown RBP9.24□□□□□ -0.93
CLCN6-202ENST00000346436 H0YIZ8 118 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 SNRNP200O75643 2136 aaKnown RBP9.23□□□□□ -0.93
CLCN6-202ENST00000346436 Q5PR19 223 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 DPH3P1Q9H4G8 78 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 CLCF1Q9UBD9 225 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 A0A0A6YYD4 124 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 TCAPO15273 167 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 GATA3P23771 443 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 FAM90A1Q86YD7 464 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 OR10G4Q8NGN3 311 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 OR10G9Q8NGN4 311 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 OR10G7Q8NGN6 311 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 Q96M66 194 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 CHCHD2Q9Y6H1 151 aaPredicted RBP9.23□□□□□ -0.93
CLCN6-202ENST00000346436 FRMPD3Q5JV73 1810 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 IGLV3-12A0A075B6K2 115 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 IL24Q13007 206 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 ASPHD2Q6ICH7 369 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF826PQ6ZT77 177 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 TMEM252Q8N6L7 170 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 ITLN2Q8WWU7 325 aaPredicted RBP9.23□□□□□ -0.93
CLCN6-202ENST00000346436 RNF126Q9BV68 326 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 RALGAPA1Q6GYQ0 2036 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 RPL7P18124 248 aaKnown RBP9.23□□□□□ -0.93
CLCN6-202ENST00000346436 TMEM241Q24JQ0 296 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 SPANXN1Q5VSR9 72 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 MYPOPQ86VE0 399 aaPredicted RBP9.23□□□□□ -0.93
CLCN6-202ENST00000346436 LURAP1Q96LR2 239 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 DTX2Q86UW9 622 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 OR10S1Q8NGN2 331 aa9.23□□□□□ -0.93
CLCN6-202ENST00000346436 CLPSP04118 112 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 PSG9Q00887 426 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 TP53RKQ96S44 253 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 TMEM204Q9BSN7 226 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 HEATR5AQ86XA9 2040 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 DUXBA0A1W2PPF3 345 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 TIMM23O14925 209 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 TEPPQ6URK8 271 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 Q6ZS92 163 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 ZNF524Q96C55 264 aa9.22□□□□□ -0.93
CLCN6-202ENST00000346436 DLL3Q9NYJ7 618 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms