RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 OR4D5Q8NGN0 318 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 MAGT1Q9H0U3 335 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 CHD6Q8TD26 2715 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 NAV2Q8IVL1 2488 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 C3orf85A0A1B0GTC6 90 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 PRDX2P32119 198 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 IL24Q13007 206 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 CCDC71LQ8N9Z2 235 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 ABHD14AQ9BUJ0 271 aa10.93□□□□□ -0.66
COL18A1-201ENST00000342220 IGKV1D-13A0A0B4J2D9 117 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 A0A1W2PPQ1 181 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 A1L4Q6 167 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 MPPED1O15442 326 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 IGKV1-13P0DP09 117 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 RPS16P62249 146 aaKnown RBP10.92□□□□□ -0.66
COL18A1-201ENST00000342220 GNMTQ14749 295 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 TMEM211Q6ICI0 200 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 C11orf42Q8N5U0 333 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 COMMD1Q8N668 190 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 BOD1Q96IK1 185 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 RARRES2Q99969 163 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 ACTR3CQ9C0K3 210 aaPredicted RBP10.92□□□□□ -0.66
COL18A1-201ENST00000342220 NCOR1P1Q9H4R4 102 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 ITGB1BP1O14713 200 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 SCGB1D1O95968 90 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 UCP3P55916 312 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 DLX1P56177 255 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 LAMP3Q9UQV4 416 aa10.92□□□□□ -0.66
COL18A1-201ENST00000342220 IGLV1-44P01699 117 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 CA7P43166 264 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 OR2C3Q8N628 320 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 ABHD14BQ96IU4 210 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 FAM210BQ96KR6 192 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 IL36GQ9NZH8 169 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 IGSF23A1L1A6 192 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 H3BQ15 152 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 CHRNB4P30926 498 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 CCL20P78556 96 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 MRPL41Q8IXM3 137 aaKnown RBP10.91□□□□□ -0.66
COL18A1-201ENST00000342220 PITPNC1Q9UKF7 332 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 STRAPQ9Y3F4 350 aaKnown RBP10.91□□□□□ -0.66
COL18A1-201ENST00000342220 TRDCB7Z8K6 153 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 K7N7A8 449 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 M0QZK8 103 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 GGCTO75223 188 aaKnown RBP10.91□□□□□ -0.66
COL18A1-201ENST00000342220 IGHV1-46P01743 117 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 PSG2P11465 335 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 TBC1D26Q86UD7 250 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 ZNF695Q8IW36 515 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 WIPI2Q9Y4P8 454 aa10.91□□□□□ -0.66
COL18A1-201ENST00000342220 SSSCA1O60232 199 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 LMO1P25800 156 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 NKX2-1P43699 371 aaPredicted RBP10.9□□□□□ -0.66
COL18A1-201ENST00000342220 ADIPOQQ15848 244 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 MPV17LQ2QL34 196 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 CXorf66Q5JRM2 361 aaPredicted RBP10.9□□□□□ -0.66
COL18A1-201ENST00000342220 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 PBDC1Q9BVG4 233 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 TMEM222Q9H0R3 208 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 RPH3ALQ9UNE2 315 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 PSG11Q9UQ72 335 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 H3BP45 60 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 KIR2DS4P43632 304 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 DLK1P80370 383 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 KIR2DS1Q14954 304 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 GCSAMQ8N6F7 178 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 OR2G3Q8NGZ4 309 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 Q9N2K0 584 aa10.9□□□□□ -0.66
COL18A1-201ENST00000342220 SERPINE2P07093 398 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF816Q0VGE8 651 aaPredicted RBP10.9□□□□□ -0.67
COL18A1-201ENST00000342220 ZNF818PQ6ZRF7 136 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 TMEM183AQ8IXX5 376 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 CMTM1Q8IZ96 169 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 OR13A1Q8NGR1 328 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 MRPL30Q8TCC3 161 aaKnown RBP10.9□□□□□ -0.67
COL18A1-201ENST00000342220 C11orf1Q9H5F2 150 aa10.9□□□□□ -0.67
COL18A1-201ENST00000342220 A0A1W2PRD5 423 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 A0A1W2PRF3 423 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 A0A1W2PRM7 423 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 ADAM20O43506 726 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 PTTG1IPP53801 180 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 LEMD1Q68G75 181 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 CD177Q8N6Q3 437 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 PKIBQ9C010 78 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 SONP18583 2426 aaKnown RBP10.89□□□□□ -0.67
COL18A1-201ENST00000342220 C20orf202A1L168 122 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 CST7O76096 145 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 GCGP01275 180 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 SELENOHQ8IZQ5 122 aaKnown RBP10.89□□□□□ -0.67
COL18A1-201ENST00000342220 OR13D1Q8NGV5 346 aa10.89□□□□□ -0.67
COL18A1-201ENST00000342220 IGKV1-6A0A0C4DH72 117 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 E7EQL1 145 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 CDS2O95674 445 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 CDKN1BP46527 198 aa10.88□□□□□ -0.67
COL18A1-201ENST00000342220 ADORA2A-AS1P86434 159 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms