RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 GOLGB1Q14789 3259 aaKnown RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FAM74A7A6NL05 159 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 PSPNO60542 156 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FABP9Q0Z7S8 132 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FAM74A3Q4VXF1 159 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 OR5B3Q8NH48 314 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 TECRQ9NZ01 308 aaKnown RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 A8MXK9 166 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 C10orf142B7Z368 130 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 COMPP49747 757 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM167BQ9NRX6 74 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 WIPF3A6NGB9 483 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 B4DEV8 164 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 OR10J1P30954 320 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 MUC15Q8N387 334 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 HS3ST6Q96QI5 342 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 PRO3102Q9H379 93 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 IFT22Q9H7X7 185 aa5.3□□□□□ -1.56
PRKDC-202ENST00000338368 FAM157AC9JC47 383 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MPDU1O75352 247 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 NAPSAO96009 420 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 CSN1S1P47710 185 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM30BQ3MIR4 351 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF324BQ6AW86 544 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 OR1L8Q8NGR8 309 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 TPPP3Q9BW30 176 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MRPL37Q9BZE1 423 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 APOBEC3AP31941 199 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RPL8P62917 257 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 CYTL1Q9NRR1 136 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 C17orf100A8MU93 164 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 BCL2P10415 239 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RAB5AP20339 215 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ERVFC1-1P60608 527 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 FAM90A1Q86YD7 464 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ZCCHC24Q8N2G6 241 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 SRRM5B3KS81 715 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 CTRB1P17538 263 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF146Q15072 292 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RPL39P5Q59GN2 51 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 CTRB2Q6GPI1 263 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF497Q6ZNH5 498 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 Q6ZS92 163 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 LRTM2Q8N967 370 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 GINS3Q9BRX5 216 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MBD3L4A6NDZ8 208 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MBD3L3A6NE82 208 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF503-AS2A6NEH8 195 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MBD3L5A6NJ08 208 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 COX6B1P14854 86 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RPL27AP46776 148 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 FHITP49789 147 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MEF2CQ06413 473 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 MBD3L2Q8NHZ7 208 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 C18orf12Q96KH6 178 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 KLRB1Q12918 225 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 PITPNC1Q9UKF7 332 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 DBX1A6NMT0 343 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 HSPB1P04792 205 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 LINC01560Q8TB33 94 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 FAM157CP0CG43 387 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 SUMO1P63165 101 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 UBE2L3P68036 154 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 DHRS7BQ6IAN0 325 aaPredicted RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 USF3Q68DE3 2245 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 TDGF1P13385 188 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RARRES2Q99969 163 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 SLC25A5P05141 298 aaKnown RBP5.29□□□□□ -1.56
PRKDC-202ENST00000338368 TIMP3P35625 211 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 LRRC75BQ2VPJ9 315 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 OR4D5Q8NGN0 318 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 RPRMQ9NS64 109 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 CLCF1Q9UBD9 225 aa5.29□□□□□ -1.56
PRKDC-202ENST00000338368 B9A039 149 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 BSPH1Q075Z2 132 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 MMDQ15546 238 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 FAM162BQ5T6X4 162 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 CCDC144NLQ6NUI1 221 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF880Q6PDB4 577 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 CYB561D1Q8N8Q1 229 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 ZNF596Q8TC21 504 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM106BQ9NUM4 274 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 RNF115Q9Y4L5 304 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 GALR1P47211 349 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 VKORC1L1Q8N0U8 176 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 OR4X1Q8NH49 305 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 CTDSP1Q9GZU7 261 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 METRNQ9UJH8 293 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SRSF7Q16629 238 aaKnown RBP eCLIP5.28□□□□□ -1.562e-12■□□□□ 11
PRKDC-202ENST00000338368 WDR31Q8NA23 367 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SNRNP40Q96DI7 357 aaKnown RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 WDR61Q9GZS3 305 aaKnown RBP5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SCGB1D1O95968 90 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 RTP5Q14D33 572 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM18Q96B42 140 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 TMEM186Q96B77 213 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 SPRY4Q9C004 299 aa5.28□□□□□ -1.56
PRKDC-202ENST00000338368 GNB4Q9HAV0 340 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms