RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 RNF182Q8N6D2 247 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ST6GALNAC3Q8NDV1 305 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 OR11G2Q8NGC1 345 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 CLEC1BQ9P126 229 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 MC5RP33032 325 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 EFNB1P98172 346 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 RUNX1Q01196 453 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 PTCRAQ6ISU1 281 aaPredicted RBP5.37□□□□□ -1.55
CSMD1-201ENST00000335551 UNQ9370/PRO34162Q6UXP9 181 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 DEFB123Q8N688 67 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 KIR3DL3Q8N743 410 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV8-1A0A0A6YYK1 113 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 SHISA7A6NL88 538 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF83P51522 516 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF585BQ52M93 769 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 PAQR9Q6ZVX9 377 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 NPFFR1Q9GZQ6 430 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 ZFP64Q9NPA5 681 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 FZR1Q9UM11 496 aa5.37□□□□□ -1.55
CSMD1-201ENST00000335551 PDCD1Q15116 288 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PLSCR4Q9NRQ2 329 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV30A0A087WSZ9 112 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FAM181BA6NEQ2 426 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PPIAL4DF5H284 164 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 GPX4P36969 197 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 GFRA1P56159 465 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FUT5Q11128 374 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 DLK2Q6UY11 383 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 MSRB3Q8IXL7 192 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 CCL17Q92583 94 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 C8orf44Q96CB5 159 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FNDC4Q9H6D8 234 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PRKNO60260 465 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ZNF645Q8N7E2 425 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 RLN3Q8WXF3 142 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SLC6A13Q9NSD5 602 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ASIPP42127 132 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 UCNP55089 124 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 IMMP2LQ96T52 175 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FSCN3Q9NQT6 498 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 TRBV20OR9-2A0A075B6H5 130 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1B0GUT8 65 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 NPFFO15130 113 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 C1QL1O75973 258 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 CLDN14O95500 239 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 GGTLC2Q14390 218 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SAMD5Q5TGI4 173 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 OR10W1Q8NGF6 305 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SF3B5Q9BWJ5 86 aaKnown RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 LPAR2Q9HBW0 351 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 UBE2CO00762 179 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SYNGR3O43761 229 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 IGHV4-39P01824 125 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FXYD3Q14802 87 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ACSF3Q4G176 576 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 APCDD1LQ8NCL9 501 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FMC1Q96HJ9 113 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 INSIG2Q9Y5U4 225 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PAPPA2Q9BXP8 1791 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 J3QT63 122 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 HSD52Q0P140 79 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ORMDL3Q8N138 153 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 OR13H1Q8NG92 308 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SCGB3A1Q96QR1 104 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PIMREGQ9BSJ6 248 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 LCTP09848 1927 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 MEX3AA1L020 520 aaKnown RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ADRA2AP08913 450 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PIGYQ3MUY2 71 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FGF22Q9HCT0 170 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 PNLIPP16233 465 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 RPL8P62917 257 aaKnown RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 SSBP2P81877 361 aaPredicted RBP5.36□□□□□ -1.55
CSMD1-201ENST00000335551 FOXC1Q12948 553 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 RTP5Q14D33 572 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 TMEM190Q8WZ59 177 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 TUBA4BQ9H853 241 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 WDR54Q9H977 334 aa5.36□□□□□ -1.55
CSMD1-201ENST00000335551 CCDC168Q8NDH2 2452 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 CD8AP01732 235 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 IL11RAQ14626 422 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 THSD4Q6ZMP0 1018 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 PNKDQ8N490 385 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 OR9G4Q8NGQ1 327 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 A0A1W2PP11 408 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 CDC42EP2O14613 210 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 MMDQ15546 238 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 WDYHV1Q96HA8 205 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 TRAV17A0A0B4J275 112 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 SRSF12Q8WXF0 261 aaKnown RBP5.35□□□□□ -1.55
CSMD1-201ENST00000335551 RAX2Q96IS3 184 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 SMIM8Q96KF7 97 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 LOXL2Q9Y4K0 774 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 A0A0U1RQV5 110 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 AGFG2O95081 481 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 C2orf68Q2NKX9 166 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 OR51G1Q8NGK1 321 aa5.35□□□□□ -1.55
CSMD1-201ENST00000335551 DLX4Q92988 240 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms