RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 HELTA6NFD8 242 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 NPIPB11E5RHQ5 1161 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 MPDU1O75352 247 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 OR10S1Q8NGN2 331 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 CACNA1AO00555 2505 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 PRR32B1ATL7 298 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 K7ENP7 123 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 RGS13O14921 159 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 CCL3L1P16619 93 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 GAS1P54826 345 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 TCL1AP56279 114 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF345Q14585 488 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
C9orf47-201ENST00000334490 NOTCH3Q9UM47 2321 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 THBDP07204 575 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 RAB5AP20339 215 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF430Q9H8G1 570 aaPredicted RBP12.67□□□□□ -0.38
C9orf47-201ENST00000334490 YAE1D1Q9NRH1 226 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 NAT8Q9UHE5 227 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 P01737 135 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 WDR82Q6UXN9 313 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 OR52M1Q8NGK5 317 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 NOL4LQ96MY1 436 aaPredicted RBP12.67□□□□□ -0.38
C9orf47-201ENST00000334490 LINC00312Q9Y6C7 94 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 IGHV3-35A0A0C4DH35 117 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 BMPR1BO00238 502 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 OR10G8Q8NGN5 311 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 IL22RA2Q969J5 263 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 LYZL4Q96KX0 146 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 GOLT1BQ9Y3E0 138 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 A0A087WV48 116 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 PROB1E7EW31 1015 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 FCN1O00602 326 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 IGHV3-48P01763 117 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 NBL1P41271 181 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 C11orf91Q3C1V1 193 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 PRSS33Q8NF86 280 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 FBXL15Q9H469 300 aa12.67□□□□□ -0.38
C9orf47-201ENST00000334490 IGKV1-9A0A0C4DH69 117 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF137PP52743 207 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 RPEL1Q2QD12 228 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 A0A0G2JNJ9 132 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 IGSF23A1L1A6 192 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 ATP5G2Q06055 141 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 LRRC75BQ2VPJ9 315 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 Q9UFV3 132 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 IGFBP3P17936 291 aaPredicted RBP12.66□□□□□ -0.38
C9orf47-201ENST00000334490 ZP3P21754 424 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 MIC13Q5XKP0 118 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 LRP11Q86VZ4 500 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 MRPL30Q8TCC3 161 aaKnown RBP12.66□□□□□ -0.38
C9orf47-201ENST00000334490 C16orf92Q96LL3 132 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 OR4C12Q96R67 309 aa12.66□□□□□ -0.38
C9orf47-201ENST00000334490 FABP4P15090 132 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 FCER1GP30273 86 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF705AQ6ZN79 300 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 TP53RKQ96S44 253 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 KIAA1324LA8MWY0 1029 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 SRSF10O75494 262 aaKnown RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 PNRC1Q12796 327 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 ZNF273Q14593 569 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 TMEM187Q14656 261 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 FAM24BQ8N5W8 94 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 PRSS3P2Q8NHM4 247 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 TMEM18Q96B42 140 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 TMEM204Q9BSN7 226 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 SLC2A8Q9NY64 477 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 IGKV1D-33P01593 117 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 IGKV1-33P01594 117 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 CRYGSP22914 178 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 RNFT1Q5M7Z0 435 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 EBLN2Q6P2I7 272 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 OSR1Q8TAX0 266 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 IGHV1-46P01743 117 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 IGHG3P01860 377 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 MELTFP08582 738 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 PRB3Q04118 309 aaPredicted RBP12.65□□□□□ -0.38
C9orf47-201ENST00000334490 LDLRAD3Q86YD5 345 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 BPIFA4PQ86YQ2 179 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 STPG3Q8N7X2 389 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 PLPPR1Q8TBJ4 325 aa12.65□□□□□ -0.38
C9orf47-201ENST00000334490 TMSB15BA0A087X1C1 80 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 PDE6DO43924 150 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 PTBP3O95758 552 aaKnown RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 ZNF735P0CB33 412 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 ST6GALNAC3Q8NDV1 305 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 OR5AU1Q8NGC0 362 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 NABP1Q96AH0 204 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TM4SF20Q53R12 229 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TAF15Q92804 592 aaKnown RBP eCLIP12.64□□□□□ -0.39
C9orf47-201ENST00000334490 SRD5A3Q9H8P0 318 aa12.64□□□□□ -0.39
C9orf47-201ENST00000334490 TRAV30A0A087WSZ9 112 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms