RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 GPX3P22352 226 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 CDKN3Q16667 212 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF658BQ4V348 819 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PAQR3Q6TCH7 311 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 OLIG1Q8TAK6 271 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 RCC1LQ96I51 464 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 FAM110AQ9BQ89 295 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 LAMB2P55268 1798 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 hADV29S1A0JD25 119 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TBX6O95947 436 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 IGHA1P01876 353 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TCRAP04437 139 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 CD70P32970 193 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 CLEC14AQ86T13 490 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 C1orf174Q8IYL3 243 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 LILRA3Q8N6C8 439 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 M0R135 149 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 CTSVO60911 334 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 GM2AP17900 193 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TIA1P31483 386 aaKnown RBP eCLIP5.26□□□□□ -1.577e-6■■■□□ 15.8
CDC42BPA-201ENST00000334218 CX3CL1P78423 397 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 NUDT8Q8WV74 236 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF799Q96GE5 643 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 WDYHV1Q96HA8 205 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 ALKBH3Q96Q83 286 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PRORYQ9H606 182 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TNFRSF19Q9NS68 423 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 WNK3Q9BYP7 1800 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A0A6YYC8 382 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 I3L1I5 382 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 SELENOPP49908 381 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF678Q5SXM1 525 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PQLC2Q6ZP29 291 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 LINC01551Q86U37 167 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 LOXL2Q9Y4K0 774 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PLCH1Q4KWH8 1693 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 HOXB3P14651 431 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 WNT3AP56704 352 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 GATD1Q8NB37 220 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 IRF7Q92985 503 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 APOBEC3GQ9HC16 384 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 SIGLEC8Q9NYZ4 499 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 PRO0628Q9UI54 55 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 FRMPD3Q5JV73 1810 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TCRBV16S1A1N1A0A5B0 115 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 TARM1B6A8C7 271 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 SIRT4Q9Y6E7 314 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 IGHV1-24A0A0C4DH33 117 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 IQCF6A8MYZ5 107 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 F8WDY8 70 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 Q8IYB0 196 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 CACNG8Q8WXS5 425 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 NTPCRQ9BSD7 190 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 DEC1Q9P2X7 70 aa5.26□□□□□ -1.57
CDC42BPA-201ENST00000334218 RGNQ15493 299 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 FAM53AQ6NSI3 398 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 METTL27Q8N6F8 245 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CYB561D1Q8N8Q1 229 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 LOXL4Q96JB6 756 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 NPVFQ9HCQ7 196 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 F11RQ9Y624 299 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF740Q8NDX6 193 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 IL11P20809 199 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 EFEMP1Q12805 493 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 ICOSLGO75144 302 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CLDN11O75508 207 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 RNASE1P07998 156 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 FGF3P11487 239 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 GABRG2P18507 467 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 RPL32P62910 135 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 TP53INP2Q8IXH6 220 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 GPR150Q8NGU9 434 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 PEX11GQ96HA9 241 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 HIST1H2BLQ99880 126 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 A0A1B0GUL6 1792 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 NHSQ6T4R5 1651 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 F2RL2O00254 374 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CYP2G1PQ6ZSU1 146 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CPEB1Q9BZB8 566 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 TAAR3PQ9P1P4 343 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 PKIGQ9Y2B9 76 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CXCL6P80162 114 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 ZNF793Q6ZN11 406 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 DOT1LQ8TEK3 1739 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 DSPPQ9NZW4 1301 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 IGHV2-70DA0A0C4DH43 119 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 DNASE2O00115 360 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 HYPMO75409 117 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 CCL14Q16627 93 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 PTOV1Q86YD1 416 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 FLYWCH2Q96CP2 140 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 ASAH2BP0C7U1 165 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 SRIP30626 198 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 FOXG1P55316 489 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 UCP2P55851 309 aa5.25□□□□□ -1.57
CDC42BPA-201ENST00000334218 K7ESF4 209 aa5.24□□□□□ -1.57
CDC42BPA-201ENST00000334218 SH2D1BO14796 132 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms