RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 ARF6P62330 175 aa8.01□□□□□ -1.13
SS18L1-201ENST00000331758 MMDQ15546 238 aa8.01□□□□□ -1.13
SS18L1-201ENST00000331758 COLCA1Q6ZS62 124 aa8.01□□□□□ -1.13
SS18L1-201ENST00000331758 OR1L8Q8NGR8 309 aa8.01□□□□□ -1.13
SS18L1-201ENST00000331758 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 MBD3L4A6NDZ8 208 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 MBD3L3A6NE82 208 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 MBD3L5A6NJ08 208 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 B9A039 149 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 TMEM11P17152 192 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 RHOBP62745 196 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 AWAT1Q58HT5 328 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 TCTEX1D1Q8N7M0 179 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 MBD3L2Q8NHZ7 208 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 SIRT7Q9NRC8 400 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 IGSF23A1L1A6 192 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 MMP9P14780 707 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 CD1BP29016 333 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 B2MP61769 119 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 RPL11P62913 178 aaKnown RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 TCF15Q12870 199 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 PRR27Q6MZM9 219 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF497Q6ZNH5 498 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 TPPP3Q9BW30 176 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 PRO1933Q9H354 126 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF835Q9Y2P0 537 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 SPCS3P61009 180 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 ABHD12Q8N2K0 398 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 SLC24A4Q8NFF2 622 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 TMEM171Q8WVE6 324 aa8□□□□□ -1.13
SS18L1-201ENST00000331758 LSM10Q969L4 123 aaKnown RBP8□□□□□ -1.13
SS18L1-201ENST00000331758 ELOA3CA0A087WX78 387 aaPredicted RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 WDR31Q8NA23 367 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 GTF3AQ92664 365 aaKnown RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SEBOXQ9HB31 216 aaPredicted RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 C7orf77A4D0Y5 90 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 LYNX1G3V0Z9 82 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SLC25A17O43808 307 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SNRPCP09234 159 aaKnown RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 LYNX1P0DP58 116 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 RAB5AP20339 215 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 CFPP27918 469 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 RND3P61587 244 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SRSF4Q08170 494 aaKnown RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 MYPOPQ86VE0 399 aaPredicted RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 MIOXQ9UGB7 285 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 RALYQ9UKM9 306 aaKnown RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SEC14L6B5MCN3 397 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 MLNRO43193 412 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 NDUFA2O43678 99 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 NAPSAO96009 420 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 CCL3L1P16619 93 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 ANOS1P23352 680 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 PAX6P26367 422 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 PRR30Q53SZ7 412 aaPredicted RBP7.99□□□□□ -1.13
SS18L1-201ENST00000331758 OR4P4Q8NGL7 312 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SPRY4Q9C004 299 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 PPIAL4CA0A0B4J2A2 164 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 B4DEV8 164 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 FGF16O43320 207 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 PAGE4O60829 102 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 PPIAL4GP0DN37 164 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF90Q03938 601 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 TMEM241Q24JQ0 296 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.135e-6■□□□□ 8.3
SS18L1-201ENST00000331758 ZDHHC16Q969W1 377 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 METRNQ9UJH8 293 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 TCF19Q9Y242 345 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 CHD9Q3L8U1 2897 aa7.99□□□□□ -1.13
SS18L1-201ENST00000331758 SPTBN4Q9H254 2564 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 CEP192Q8TEP8 1941 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 A0A0G2JNJ9 132 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 RAB4AP20338 218 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 PRB3Q04118 309 aaPredicted RBP7.98□□□□□ -1.13
SS18L1-201ENST00000331758 TEPPQ6URK8 271 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 Q9UFV3 132 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 IGKV3-15P01624 115 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 IGHV1-46P01743 117 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 SERF2P84101 59 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 PNRC1Q12796 327 aaPredicted RBP7.98□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF146Q15072 292 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 HCP5Q6MZN7 132 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF439Q8NDP4 499 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 VKORC1Q9BQB6 163 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 CRIM1Q9NZV1 1036 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 TUBD1Q9UJT1 453 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 SLC45A2Q9UMX9 530 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 YLPM1P49750 1951 aaKnown RBP7.98□□□□□ -1.13
SS18L1-201ENST00000331758 SRRM5B3KS81 715 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 FAM90A26D6RGX4 464 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 Q56UQ5 140 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 FAM209BQ5JX69 171 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 SLC35E3Q7Z769 313 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 ZNF596Q8TC21 504 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 BLNKQ8WV28 456 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 COL25A1Q9BXS0 654 aaPredicted RBP7.98□□□□□ -1.13
SS18L1-201ENST00000331758 NPVFQ9HCQ7 196 aa7.98□□□□□ -1.13
SS18L1-201ENST00000331758 EML6Q6ZMW3 1958 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms