RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM181BA6NEQ2 426 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 IL6RP08887 468 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-201ENST00000327367 GLRX5Q86SX6 157 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 RNASE7Q9H1E1 156 aaKnown RBP14.09□□□□□ -0.15
SMAD3-201ENST00000327367 GTSF1LQ9H1H1 148 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 MRPS16Q9Y3D3 137 aaKnown RBP14.09□□□□□ -0.15
SMAD3-201ENST00000327367 CDX4O14627 284 aaPredicted RBP14.09□□□□□ -0.15
SMAD3-201ENST00000327367 C1orf185Q5T7R7 199 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 TMEM92Q6UXU6 159 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 TAF1P21675 1872 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 A0A1W2PRS3 328 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 NGFRP08138 427 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
SMAD3-201ENST00000327367 TMEM240Q5SV17 173 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 DNASE2BQ8WZ79 361 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 COX14Q96I36 57 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 KIR2DL4Q99706 377 aa14.09□□□□□ -0.15
SMAD3-201ENST00000327367 CD8AP01732 235 aa14.08□□□□□ -0.15
SMAD3-201ENST00000327367 OR51G1Q8NGK1 321 aa14.08□□□□□ -0.15
SMAD3-201ENST00000327367 CLDND2Q8NHS1 167 aa14.08□□□□□ -0.15
SMAD3-201ENST00000327367 NPIPB3Q92617 1050 aa14.08□□□□□ -0.15
SMAD3-201ENST00000327367 PRDM13Q9H4Q3 707 aa14.08□□□□□ -0.15
SMAD3-201ENST00000327367 LSM4Q9Y4Z0 139 aaKnown RBP14.08□□□□□ -0.15
SMAD3-201ENST00000327367 TRAV14DV4A0A0A6YYC5 116 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TRAV24A0A0B4J272 114 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 LEPP41159 167 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TBR1Q16650 682 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TMEM155Q4W5P6 130 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TIMP4Q99727 224 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 PHF7Q9BWX1 381 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TRBV5-7A0A0A0MS05 114 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 SHISA3A0PJX4 238 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 TMEM262E9PQX1 116 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BKO60814 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BJP06899 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BOP23527 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BBP33778 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BDP58876 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 RPS20P60866 119 aaKnown RBP14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BCP62807 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST2H2BEQ16778 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 ISXQ2M1V0 245 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-201ENST00000327367 C10orf128Q5T292 105 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BHQ93079 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BNQ99877 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 HIST1H2BMQ99879 126 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 NPCDR1Q9BY65 106 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 UBE2CO00762 179 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 IGHV3-49A0A0A0MS15 119 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 CISD3P0C7P0 127 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 PRTN3P24158 256 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 PSG9Q00887 426 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 ICAM4Q14773 271 aa14.08□□□□□ -0.16
SMAD3-201ENST00000327367 CD1AP06126 327 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 SAA1P0DJI8 122 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-201ENST00000327367 IL11RAQ14626 422 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 TPTE2P1Q5T6R2 138 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 CD200R1LQ6Q8B3 271 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 WDR82Q6UXN9 313 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 SDF2L1Q9HCN8 221 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 LAMB1P07942 1786 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 NPFFO15130 113 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 DRD3P35462 400 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 COPS9Q8WXC6 57 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 DPH3Q96FX2 82 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 SMIM8Q96KF7 97 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 HEXA-AS1Q9H8Q6 139 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 CD160O95971 181 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 HOXB1P14653 301 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-201ENST00000327367 C1QL4Q86Z23 238 aa14.07□□□□□ -0.16
SMAD3-201ENST00000327367 PAX2Q02962 417 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 DLL3Q9NYJ7 618 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 CALYQ9NYX4 217 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 PEX7O00628 323 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 CA11O75493 328 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 PF4V1P10720 104 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 SRFP11831 508 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 C1QTNF9P0C862 333 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 SLC25A28Q96A46 364 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 TRBV7-9A0A0J9YWB2 115 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 RNF222A6NCQ9 220 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 CEACAM1P13688 526 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 SELENOTP62341 195 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 FAM181AQ8N9Y4 354 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 ZNF721Q8TF20 911 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 TOMM7Q9P0U1 55 aa14.06□□□□□ -0.16
SMAD3-201ENST00000327367 LIFP15018 202 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 RPL23P62829 140 aaKnown RBP14.05□□□□□ -0.16
SMAD3-201ENST00000327367 MAST2Q6P0Q8 1798 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 VENTXO95231 258 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 UNQ5815/PRO19632Q6UWF5 114 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 C9orf172C9J069 976 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 NUTF2P61970 127 aaKnown RBP14.05□□□□□ -0.16
SMAD3-201ENST00000327367 PPIAL4EA0A075B759 164 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 PPIAL4FP0DN26 164 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 IGFBP2P18065 325 aa14.05□□□□□ -0.16
SMAD3-201ENST00000327367 GATAD1Q8WUU5 269 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms