RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 MARCH11A6NNE9 402 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 SPDEFO95238 335 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 IGKV1-5P01602 117 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 P0C879 139 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 VDAC1P21796 283 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 ERVK-16P61578 105 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 RRAS2P62070 204 aaPredicted RBP10.9□□□□□ -0.66
PRPF18-201ENST00000320054 RPS16P62249 146 aaKnown RBP10.9□□□□□ -0.66
PRPF18-201ENST00000320054 Q6YL49 198 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 LYZL2Q7Z4W2 148 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 FAM219AQ8IW50 185 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 UXS1Q8NBZ7 420 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 OR8H1Q8NGG4 311 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 RHOVQ96L33 236 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 HARBI1Q96MB7 349 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 MMP24Q9Y5R2 645 aa10.9□□□□□ -0.66
PRPF18-201ENST00000320054 TNCP24821 2201 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 TET2Q6N021 2002 aaPredicted RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 MDFIC2A0A1B0GVS7 189 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 SRRM4A7MD48 611 aaKnown RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 KRASP01116 189 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 IFNA21P01568 189 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 IGLV2-23P01705 113 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 IL6RP08887 468 aaPredicted RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 HOXB5P09067 269 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 SULT1A3P0DMM9 295 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 SULT1A4P0DMN0 295 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 CD24P25063 80 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 G6PCP35575 357 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 IER3P46695 156 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 AKR1C2P52895 323 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 UBE2KP61086 200 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 HES1Q14469 280 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 VMA21Q3ZAQ7 101 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 NMSQ5H8A3 153 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 GGNBP1Q5YKI7 109 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 PUSL1Q8N0Z8 303 aaKnown RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 NPBQ8NG41 125 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 OR5R1Q8NH85 324 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 C22orf15Q8WYQ4 148 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 RRNAD1Q96FB5 475 aaKnown RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 RITA1Q96K30 269 aa10.89□□□□□ -0.67
PRPF18-201ENST00000320054 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 GSX1Q9H4S2 264 aaPredicted RBP10.89□□□□□ -0.67
PRPF18-201ENST00000320054 A6NDX4 124 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 HMX3A6NHT5 357 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 H3BUX3 64 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 ADAP1O75689 374 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 NDUFA3O95167 84 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 TRAPPC2P0DI81 140 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 TRAPPC2BP0DI82 140 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 SLC25A6P12236 298 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 TMEM11P17152 192 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 SRD5A1P18405 259 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 PSG5Q15238 335 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 C2orf68Q2NKX9 166 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 H2BFWTQ7Z2G1 175 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 TEX45Q8NA69 505 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 DMBX1Q8NFW5 382 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 OR5M8Q8NGP6 311 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 OR4A5Q8NH83 315 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 RNASE11Q8TAA1 199 aaKnown RBP10.88□□□□□ -0.67
PRPF18-201ENST00000320054 VSTM2AQ8TAG5 236 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 BET1LQ9NYM9 111 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 C1RLQ9NZP8 487 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 MGAT4CQ9UBM8 478 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 PITPNC1Q9UKF7 332 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 TCF19Q9Y242 345 aa10.88□□□□□ -0.67
PRPF18-201ENST00000320054 hCG_2014768A0A024R1R8 64 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 A0A0G2JRQ6 117 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 A0A1B0GU03 582 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 GOSR2O14653 212 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 NBR2O15453 112 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 OR2A4O95047 310 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 CRYGBP07316 175 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 FGF2P09038 288 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 SAA1P0DJI8 122 aaPredicted RBP10.87□□□□□ -0.67
PRPF18-201ENST00000320054 BCAP31P51572 246 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 HNF4GQ14541 408 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 FCN2Q15485 313 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 FBLN7Q53RD9 439 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 OR4A47Q6IF82 309 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 C16orf82Q7Z2V1 217 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 TMEM86BQ8N661 226 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 OR11H7Q8NGC8 314 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 TMEM167AQ8TBQ9 72 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 SSMEM1Q8WWF3 244 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 GPR146Q96CH1 333 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 RBMXL1Q96E39 390 aaKnown RBP10.87□□□□□ -0.67
PRPF18-201ENST00000320054 RBM14Q96PK6 669 aaKnown RBP10.87□□□□□ -0.67
PRPF18-201ENST00000320054 OR2A7Q96R45 310 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 SPIN2AQ99865 258 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 SPIN2BQ9BPZ2 258 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 PLSCR3Q9NRY6 295 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 TMEM140Q9NV12 185 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 COA4Q9NYJ1 87 aa10.87□□□□□ -0.67
PRPF18-201ENST00000320054 POMT1Q9Y6A1 747 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms