RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 OR4S2Q8NH73 311 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 ZDHHC16Q969W1 377 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 Q9UFV3 132 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 CACNA1DQ01668 2161 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 ELOA3CA0A087WX78 387 aaPredicted RBP12.37□□□□□ -0.43
CHFR-202ENST00000315585 LHBP01229 141 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 IFNA10P01566 189 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 NKX6-1P78426 367 aaPredicted RBP12.37□□□□□ -0.43
CHFR-202ENST00000315585 SSX7Q7RTT5 188 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
CHFR-202ENST00000315585 IGLV3-9A0A075B6K5 115 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 SEC14L6B5MCN3 397 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 C16orf97H3BN30 126 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 VENTXO95231 258 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 CDC34P49427 236 aaPredicted RBP12.36□□□□□ -0.43
CHFR-202ENST00000315585 CASP6P55212 293 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 EDDM3BP56851 147 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 CD81P60033 236 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 ALKBH2Q6NS38 261 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 RAB24Q969Q5 203 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 ANAPC16Q96DE5 110 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 OR5B12Q96R08 314 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 QTRT1Q9BXR0 403 aaKnown RBP12.36□□□□□ -0.43
CHFR-202ENST00000315585 SLC25A22Q9H936 323 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 TGIF2-C20orf24A0A0A6YYL0 155 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 A0A1W2PPV4 95 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 IGKV1D-33P01593 117 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 IGKV1-33P01594 117 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 CXCL1P09341 107 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 FAM27E3Q08E93 113 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 LTC4SQ16873 150 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 BSXQ3C1V8 233 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 ZNF343Q6P1L6 599 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 NANPQ8TBE9 248 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 BTF3L4Q96K17 158 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 FAM234AQ9H0X4 552 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 HEYLQ9NQ87 328 aaPredicted RBP12.36□□□□□ -0.43
CHFR-202ENST00000315585 CALYQ9NYX4 217 aa12.36□□□□□ -0.43
CHFR-202ENST00000315585 TRGV10A0A0A0MS01 117 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 PDE6DO43924 150 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 EGR1P18146 543 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 LOXL3P58215 753 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 MOGAT3Q86VF5 341 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 NIT2Q9NQR4 276 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 DOK5Q9P104 306 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 RNF7Q9UBF6 113 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 IL19Q9UHD0 177 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 TRGV8A0A0C4DH27 118 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 THBS3P49746 956 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 NDUFA6P56556 154 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 TMEM108Q6UXF1 575 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 RND1Q92730 232 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 NEIL1Q96FI4 390 aaPredicted RBP12.35□□□□□ -0.43
CHFR-202ENST00000315585 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
CHFR-202ENST00000315585 GAR1Q9NY12 217 aaKnown RBP12.35□□□□□ -0.43
CHFR-202ENST00000315585 USF3Q68DE3 2245 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 SVILO95425 2214 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 OR9G9P0C7N8 305 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 OPRK1P41145 380 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 B2MP61769 119 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 KLRB1Q12918 225 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 RAB31Q13636 194 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 ADIRFQ15847 76 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
CHFR-202ENST00000315585 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 VKORC1Q9BQB6 163 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 OR51M1Q9H341 326 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 ENY2Q9NPA8 101 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
CHFR-202ENST00000315585 KBTBD11-OT1A0A1B0GTJ5 212 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 SPRY3O43610 288 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 CLN5O75503 358 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 APC2O95996 2303 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 IRF2P14316 349 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 TFF3Q07654 80 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 CORO2AQ92828 525 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 SDSLQ96GA7 329 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 DCTN5Q9BTE1 182 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 IFI27L2Q9H2X8 130 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 HEATR1Q9H583 2144 aaKnown RBP12.33□□□□□ -0.43
CHFR-202ENST00000315585 SH3BGRL2Q9UJC5 107 aa12.33□□□□□ -0.43
CHFR-202ENST00000315585 HRASP01112 189 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 TRGC2P03986 189 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 TFF1P04155 84 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 LRP11Q86VZ4 500 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 TGIF2LYQ8IUE0 185 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 ZNRF1Q8ND25 227 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 OR10A7Q8NGE5 316 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 GFOD1Q9NXC2 390 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 AKAP13Q12802 2813 aa12.33□□□□□ -0.44
CHFR-202ENST00000315585 F6UZH7 168 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 H7BYZ3 331 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 DLL1O00548 723 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 CGB3P0DN86 165 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 CGB7P0DN87 165 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 CD40P25942 277 aa12.32□□□□□ -0.44
CHFR-202ENST00000315585 ATP5IP56385 69 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms