RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 ZNF343Q6P1L6 599 aa17.68■□□□□ 0.42
LTBP3-201ENST00000301873 TMEM116Q8NCL8 245 aa17.68■□□□□ 0.42
LTBP3-201ENST00000301873 SNRNP40Q96DI7 357 aaKnown RBP17.68■□□□□ 0.42
LTBP3-201ENST00000301873 PATJQ8NI35 1801 aa17.68■□□□□ 0.42
LTBP3-201ENST00000301873 ANK1P16157 1881 aa17.68■□□□□ 0.42
LTBP3-201ENST00000301873 LTBP1Q14766 1721 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 H3BTX0 84 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 KBTBD11O94819 623 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 ACAA1P09110 424 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 SRP14P37108 136 aaKnown RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 PSG7Q13046 419 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 DCTN5Q9BTE1 182 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 TM2D1Q9BX74 207 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 GPR61Q9BZJ8 451 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 DICER1Q9UPY3 1922 aaKnown RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 APCSP02743 223 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 IGFBP3P17936 291 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 OR5R1Q8NH85 324 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 RTBDNQ9BSG5 229 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 GSX1Q9H4S2 264 aaPredicted RBP17.67■□□□□ 0.42
LTBP3-201ENST00000301873 IDI2-AS1Q9NZ38 188 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 SCN5AQ14524 2016 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 REG1AP05451 166 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 EFNB1P98172 346 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 C19orf35Q6ZS72 473 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 FADS6Q8N9I5 356 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 GALNT14Q96FL9 552 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 BET1LQ9NYM9 111 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 J3QR89 54 aa17.67■□□□□ 0.42
LTBP3-201ENST00000301873 IGHV3-35A0A0C4DH35 117 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 RNF222A6NCQ9 220 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 ISLRO14498 428 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 TBX15Q96SF7 602 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 JPT1Q9UK76 154 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 RPL39P5Q59GN2 51 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 LSM10Q969L4 123 aaKnown RBP17.66■□□□□ 0.42
LTBP3-201ENST00000301873 A8MWL6 223 aa17.66■□□□□ 0.42
LTBP3-201ENST00000301873 TGIF2-C20orf24A0A0A6YYL0 155 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 IBA57Q5T440 356 aaKnown RBP17.65■□□□□ 0.42
LTBP3-201ENST00000301873 P2RX4Q99571 388 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 SCGB1C2P0DMR2 95 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 CRYBB3P26998 211 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 MEGF10Q96KG7 1140 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 GUCD1Q96NT3 240 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 PRR19A6NJB7 356 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 GLRXP35754 106 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 UCNP55089 124 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 OR4A5Q8NH83 315 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 SCNM1Q9BWG6 230 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 ARL14EPLP0DKL9 152 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 DGAT2L7PQ6IED9 249 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 NPIPB3Q92617 1050 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 SMIM8Q96KF7 97 aa17.65■□□□□ 0.42
LTBP3-201ENST00000301873 J3QRE1 110 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 CORTO00230 105 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 ZNF735P0CB33 412 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 RNF224P0DH78 156 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 TNFSF10P50591 281 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 FXYD3Q14802 87 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 LRRC75BQ2VPJ9 315 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 KIAA1644Q3SXP7 199 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 TMEM45BQ96B21 275 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 PSME4Q14997 1843 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 UCP1P25874 307 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 RCC1LQ96I51 464 aaKnown RBP17.64■□□□□ 0.41
LTBP3-201ENST00000301873 PARLQ9H300 379 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 OR8A1Q8NGG7 326 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 HSPB9Q9BQS6 159 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 DNAJC4Q9NNZ3 241 aa17.64■□□□□ 0.41
LTBP3-201ENST00000301873 CELA3BP08861 270 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 OR10S1Q8NGN2 331 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 TXNDC17Q9BRA2 123 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 FANCMQ8IYD8 2048 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 TRAV14DV4A0A0A6YYC5 116 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 EFNA2O43921 213 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 SSX8Q7RTT4 187 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 C1QTNF5Q9BXJ0 243 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 ZNF430Q9H8G1 570 aaPredicted RBP17.63■□□□□ 0.41
LTBP3-201ENST00000301873 PPIAL4CA0A0B4J2A2 164 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 PPIAL4GP0DN37 164 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 NUBP1P53384 320 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 TCTAP57738 103 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 SLC35E4Q6ICL7 350 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 GBGT1Q8N5D6 347 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 DEPPQ9NTK1 212 aa17.63■□□□□ 0.41
LTBP3-201ENST00000301873 C8orf88P0DMB2 117 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 AGAP20933 346 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 PAQR4Q8N4S7 273 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-201ENST00000301873 WBP1Q96G27 269 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 MAP1LC3CQ9BXW4 147 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 DIRC3C9JPN6 131 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 RRHO14718 337 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 RPL7P18124 248 aaKnown RBP17.62■□□□□ 0.41
LTBP3-201ENST00000301873 HOXA4Q00056 320 aaPredicted RBP17.62■□□□□ 0.41
LTBP3-201ENST00000301873 ATRAIDQ6UW56 229 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 OR4C13Q8NGP0 309 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 GFI1Q99684 422 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 RNF115Q9Y4L5 304 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 DLL1O00548 723 aa17.62■□□□□ 0.41
LTBP3-201ENST00000301873 KLF7O75840 302 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms