RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PPP1CAP62136 330 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 STPG3Q8N7X2 389 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 A0A087X0K7 114 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 A0A1W2PPC1 479 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 CCL11P51671 97 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 ICAM4Q14773 271 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 FOXB1Q99853 325 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 CTSVO60911 334 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 KIR3DL2P43630 455 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM52BQ4KMG9 183 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 TOX2Q96NM4 488 aa10.18□□□□□ -0.78
SHROOM3-201ENST00000296043 GCHFRP30047 84 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 C10orf128Q5T292 105 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 RTN4RL2Q86UN3 420 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 CRIM1Q9NZV1 1036 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 ZNF83P51522 516 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 HARBI1Q96MB7 349 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 PRELID3AQ96N28 172 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 RABAC1Q9UI14 185 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 LAMTOR5O43504 91 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 ECSCRQ19T08 205 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 GPR82Q96P67 336 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 ST20Q9HBF5 79 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 FGF22Q9HCT0 170 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 C8orf82Q6P1X6 216 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 OR2H1Q9GZK4 316 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 CEACAM18A8MTB9 384 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 SUMO3P55854 103 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 FAM74A4Q5TZK3 123 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM178AQ8NBL3 297 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 CLDND2Q8NHS1 167 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 GPR35Q9HC97 309 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 SSC5DA1L4H1 1573 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 SCO2A0A1W2PP80 73 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 HOXA3O43365 443 aaPredicted RBP10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 COX5BP10606 129 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 LRRC75BQ2VPJ9 315 aa10.17□□□□□ -0.78
SHROOM3-201ENST00000296043 DCAF10Q5QP82 559 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 ZBTB34Q8NCN2 500 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 CCL4L1Q8NHW4 92 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 AQP3Q92482 292 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 VENTXO95231 258 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 GPR146Q96CH1 333 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 TMEM250H0YL14 139 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 SCGB3A1Q96QR1 104 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 MYOZ1Q9NP98 299 aaPredicted RBP10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 TRBV20OR9-2A0A075B6H5 130 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 HELZP42694 1942 aaKnown RBP10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 FAM181BA6NEQ2 426 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 CD8AP01732 235 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 SRSF5Q13243 272 aaKnown RBP10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 TRBV5-4A0A0C4DH59 114 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 SIGLEC1Q9BZZ2 1709 aa10.16□□□□□ -0.78
SHROOM3-201ENST00000296043 REG1BP48304 166 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 SYT8Q8NBV8 401 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 OR1N1Q8NGS0 311 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 UMODP07911 640 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 SPRED2Q7Z698 418 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 HEPN1Q6WQI6 88 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 GOLT1AQ6ZVE7 132 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 C1QL4Q86Z23 238 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 LSM6P62312 80 aaKnown RBP10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 OR13H1Q8NG92 308 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 MBNL3Q9NUK0 354 aaKnown RBP10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 TAF1LQ8IZX4 1826 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 RPL36A-HNRNPH2H7BZ11 118 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 MSGN1A6NI15 193 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 CX3CL1P78423 397 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 MYEOVQ96EZ4 313 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 VKORC1Q9BQB6 163 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 RPRMQ9NS64 109 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 HSPE1P61604 102 aaKnown RBP10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 FBLIM1Q8WUP2 373 aa10.15□□□□□ -0.78
SHROOM3-201ENST00000296043 RAC3P60763 192 aa10.15□□□□□ -0.79
SHROOM3-201ENST00000296043 VSTM2AQ8TAG5 236 aa10.15□□□□□ -0.79
SHROOM3-201ENST00000296043 HCFC1P51610 2035 aa10.15□□□□□ -0.79
SHROOM3-201ENST00000296043 YPEL5P62699 121 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 HIST1H4AP62805 103 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 RPL31P62899 125 aaKnown RBP10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 OR6X1Q8NH79 312 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 UCP2P55851 309 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 HSD52Q0P140 79 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 MGST2Q99735 147 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 TMUB1Q9BVT8 246 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 C1orf194Q5T5A4 169 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 HCP5Q6MZN7 132 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 GABRG2P18507 467 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 CAPZBP47756 277 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
SHROOM3-201ENST00000296043 CST9LQ9H4G1 147 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms