RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 GBF1Q92538 1859 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 A0A1W2PN81 502 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 CD1BP29016 333 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 LCN2P80188 198 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM187Q14656 261 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 IBA57Q5T440 356 aaKnown RBP9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 ARTNQ5T4W7 220 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 SLC35E4Q6ICL7 350 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 TGIF2LYQ8IUE0 185 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 C1orf162Q8NEQ5 155 aaPredicted RBP9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 LINC00470Q9BZP3 86 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 TBL2Q9Y4P3 447 aaKnown RBP9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 IGSF23A1L1A6 192 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 RPL36A-HNRNPH2H7BZ11 118 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 THY1P04216 161 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 FXYD3Q14802 87 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 MMD2Q8IY49 270 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 LYG1Q8N1E2 194 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 TXNDC17Q9BRA2 123 aa9.71□□□□□ -0.86
NPC1L1-201ENST00000289547 AMBPP02760 352 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 ISG15P05161 165 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 GNLYP22749 145 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 RIGQ13278 110 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 SDF2L1Q9HCN8 221 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 SNRNP200O75643 2136 aaKnown RBP9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 ANKRD36A6QL64 1941 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM210A6NLX4 147 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 CXCL1P09341 107 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 FDX2Q6P4F2 183 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 DTX1Q86Y01 620 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 OR8G5Q8NG78 346 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 LINC01560Q8TB33 94 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 ST6GALNAC6Q969X2 333 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM230Q96A57 120 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 GPR146Q96CH1 333 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 HBZP02008 142 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 PMELP40967 661 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 PDLIM4P50479 330 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 IZUMO4Q1ZYL8 232 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM56Q96MV1 263 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 CACNA1GO43497 2377 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM14DPA8MWL7 114 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 C5orf17Q8NAS9 161 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 SFRP2Q96HF1 295 aa9.7□□□□□ -0.86
NPC1L1-201ENST00000289547 PIKFYVEQ9Y2I7 2098 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 A0A0G2JMM0 328 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 A0A1W2PPB8 328 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 A0A1W2PRS3 328 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 hADV38S2A0JD32 116 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 KIR3DP1A8MWS1 328 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 B9A039 149 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 ZIC3O60481 467 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 UCP2P55851 309 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 FBLN7Q53RD9 439 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 TEPPQ6URK8 271 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 BEND2Q8NDZ0 799 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 FLYWCH2Q96CP2 140 aaKnown RBP9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 AAMDCQ9H7C9 122 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 ZNF430Q9H8G1 570 aaPredicted RBP9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM106BQ9NUM4 274 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 PXMP4Q9Y6I8 212 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 IGLV1-36A0A0B4J1U3 117 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 H0Y980 276 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 IL18BPO95998 194 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 MST1P26927 711 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 PI4KAP42356 2102 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 AMMECR1Q9Y4X0 333 aaPredicted RBP9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 NOTCH4Q99466 2003 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 NDUFS8O00217 210 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 HLA-DRB1P01911 266 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 SCTP09683 121 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 OR4A8P0C604 315 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 LINC00614P0C842 121 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 KHDC1LQ5JSQ8 128 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 PQLC2Q6ZP29 291 aa9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 SELENOHQ8IZQ5 122 aaKnown RBP9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 NUDT16L1Q9BRJ7 211 aaKnown RBP9.69□□□□□ -0.86
NPC1L1-201ENST00000289547 IGLV3-32A0A0A0MS00 114 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 MARCH11A6NNE9 402 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 RPL11P62913 178 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 SLC25A53Q5H9E4 307 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 C1QL4Q86Z23 238 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 TMEM170AQ8WVE7 144 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 CEACAM3P40198 252 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 RBM11P57052 281 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 MMDQ15546 238 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 MTURNQ8N3F0 131 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 CLDND2Q8NHS1 167 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 NUDT11Q96G61 164 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 MARS2Q96GW9 593 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 HELZP42694 1942 aaKnown RBP9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 TECTAO75443 2155 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 VENTXO95231 258 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 TIMP3P35625 211 aa9.68□□□□□ -0.86
NPC1L1-201ENST00000289547 OR4F17Q8NGA8 305 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms