RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 TMEM106BQ9NUM4 274 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 PLP1P60201 277 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 GPR146Q96CH1 333 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 KIAA0100Q14667 2235 aaKnown RBP17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 FABP2P12104 132 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 HOXA6P31267 233 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 MMP16P51512 607 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 NPC2P61916 151 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 C1QL1O75973 258 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 ASIPP42127 132 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 TMEM42Q69YG0 159 aa17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 ZCCHC24Q8N2G6 241 aaKnown RBP17.36■□□□□ 0.37
CACNA1B-201ENST00000277549 IGHV3-64A0A075B6Q5 118 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 RRHO14718 337 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 C8orf46Q8TAG6 207 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 CD160O95971 181 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 PEMTQ9UBM1 199 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 NINQ8N4C6 2090 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 TRGV4A0A0C4DH28 118 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 FGF9P31371 208 aaPredicted RBP17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 HOGA1Q86XE5 327 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 HMGCLL1Q8TB92 370 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 TRAV21A0A0B4J279 112 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 ITGB4P16144 1822 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 FAM27BQ5VT28 67 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 EGR1P18146 543 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 KIR3DL3Q8N743 410 aa17.35■□□□□ 0.37
CACNA1B-201ENST00000277549 H0YL77 283 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 SH3BGRL3Q9H299 93 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 DOCK1Q14185 1865 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 FAM216BQ8N7L0 139 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 RFPL3SP0C7P2 107 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 TRGC1P0CF51 173 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 SFTA2Q6UW10 78 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 ELOVL5Q9NYP7 299 aa17.34■□□□□ 0.37
CACNA1B-201ENST00000277549 NDUFA2O43678 99 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 IGHV4-39P01824 125 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 TMEM136Q6ZRR5 245 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 SELENOHQ8IZQ5 122 aaKnown RBP17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 KCNK7Q9Y2U2 307 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 ELOA3CA0A087WX78 387 aaPredicted RBP17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 LEPROTL1O95214 131 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 CNTFRP26992 372 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 CLPPQ16740 277 aaPredicted RBP17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 RAB24Q969Q5 203 aa17.33■□□□□ 0.37
CACNA1B-201ENST00000277549 A0A1W2PQM1 296 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 GGCTO75223 188 aaKnown RBP17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF506Q5JVG8 444 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 LAMB1P07942 1786 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 TGIF2-C20orf24A0A0A6YYL0 155 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 PAPPAQ13219 1627 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 MARCH11A6NNE9 402 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 SOD3P08294 240 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 AMELYQ99218 206 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 TUBD1Q9UJT1 453 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 MOSPD3O75425 235 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 CD7P09564 240 aa17.33■□□□□ 0.36
CACNA1B-201ENST00000277549 ERVK11-1P61568 191 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 JOSD1Q15040 202 aaPredicted RBP17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF688P0C7X2 276 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 FAM74A3Q4VXF1 159 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 PLSCR2Q9NRY7 297 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 JKAMPQ9P055 326 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 SRIP30626 198 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 SURF2Q15527 256 aaPredicted RBP17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 COPS9Q8WXC6 57 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 ARPC1AQ92747 370 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 CDK2AP2O75956 126 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 H0Y980 276 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 C1QL2Q7Z5L3 287 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 C10orf126Q8N4M7 172 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 TNFSF10P50591 281 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 TDGF1P3P51864 188 aa17.32■□□□□ 0.36
CACNA1B-201ENST00000277549 FGF5P12034 268 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 PTPRZ1P23471 2315 aaPredicted RBP17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 A0A0G2JMM0 328 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 A0A1W2PPB8 328 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 A0A1W2PRS3 328 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 KIR3DP1A8MWS1 328 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 TMEM127O75204 238 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 IFT22Q9H7X7 185 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 IGHV3-53P01767 116 aa17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.31■□□□□ 0.36
CACNA1B-201ENST00000277549 COTL1Q14019 142 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 LOC390937A0A1W2PQ73 354 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF703Q9H7S9 590 aaPredicted RBP17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 BCL2P10415 239 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 TNRC6CQ9HCJ0 1690 aaKnown RBP17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 CDS2O95674 445 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 CA11O75493 328 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 DNM1P46Q6ZS02 220 aa17.3■□□□□ 0.36
CACNA1B-201ENST00000277549 CD300CQ08708 224 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF818PQ6ZRF7 136 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 REC114Q7Z4M0 266 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 TMEM183AQ8IXX5 376 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 TEX45Q8NA69 505 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 ST6GALNAC6Q969X2 333 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 MRPL16Q9NX20 251 aaKnown RBP17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 ZNF585BQ52M93 769 aa17.29■□□□□ 0.36
CACNA1B-201ENST00000277549 TMEM186Q96B77 213 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms