RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
ERBB2-201ENST00000269571 SF3B5Q9BWJ5 86 aaKnown RBP10.35□□□□□ -0.75
ERBB2-201ENST00000269571 IL36RNQ9UBH0 155 aa10.35□□□□□ -0.75
ERBB2-201ENST00000269571 RALGAPA2Q2PPJ7 1873 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TRBV6-7A0A0A0MS04 114 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 A0A0A6YYD4 124 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 ZG16O60844 167 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 AMMECR1LQ6DCA0 310 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 GFRALQ6UXV0 394 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 OR2T6Q8NHC8 308 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 CLDND2Q8NHS1 167 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 FGF11Q92914 225 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 ST6GALNAC6Q969X2 333 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 IL36GQ9NZH8 169 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 SCN8AQ9UQD0 1980 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 FER1L5A0AVI2 2057 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 PPIHO43447 177 aaKnown RBP10.34□□□□□ -0.75
ERBB2-201ENST00000269571 OR2J3O76001 311 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 CEBPDP49716 269 aaPredicted RBP10.34□□□□□ -0.75
ERBB2-201ENST00000269571 SSX8Q7RTT4 187 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 OR10W1Q8NGF6 305 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 RNASEH2CQ8TDP1 164 aaKnown RBP10.34□□□□□ -0.75
ERBB2-201ENST00000269571 PCNX1Q96RV3 2341 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 GBF1Q92538 1859 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TMEM250H0YL14 139 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 M0QZ24 198 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 SLC17A3O00476 420 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 SRIP30626 198 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 PMS2CLQ68D20 193 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 OR8B3Q8NGG8 313 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 CST9LQ9H4G1 147 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 PXMP4Q9Y6I8 212 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 IGKV1-9A0A0C4DH69 117 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TMEM238C9JI98 176 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 S1PR2O95136 353 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 CD33P20138 364 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TNFRSF14Q92956 283 aa10.34□□□□□ -0.75
ERBB2-201ENST00000269571 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 LRRC37A2A6NM11 1700 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 PROB1E7EW31 1015 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 NDUFB3O43676 98 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 AGFG2O95081 481 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 CXorf1O96002 111 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 TRIP6Q15654 476 aaKnown RBP10.33□□□□□ -0.76
ERBB2-201ENST00000269571 TMEM186Q96B77 213 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 FLYWCH2Q96CP2 140 aaKnown RBP10.33□□□□□ -0.76
ERBB2-201ENST00000269571 ZNF71Q9NQZ8 489 aaPredicted RBP10.33□□□□□ -0.76
ERBB2-201ENST00000269571 POLR3KQ9Y2Y1 108 aaPredicted RBP10.33□□□□□ -0.76
ERBB2-201ENST00000269571 MYLKQ15746 1914 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 PLAUP00749 431 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 PSG1P11464 419 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 FGF12P61328 243 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.33□□□□□ -0.76
ERBB2-201ENST00000269571 TCF23Q7RTU1 214 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 MUC15Q8N387 334 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 OR5A2Q8NGI9 324 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 WDR81Q562E7 1941 aa10.33□□□□□ -0.76
ERBB2-201ENST00000269571 E9PQ18 207 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 J3QT63 122 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 IGKV3-11P04433 115 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 GNB2P62879 340 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 ZNF837Q96EG3 531 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 NRN1Q9NPD7 142 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 K7N7A8 449 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 NPY1RP25929 384 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 CEACAM8P31997 349 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 ANKRD39Q53RE8 183 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 PQLC2Q6ZP29 291 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 ZNF826PQ6ZT77 177 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 OR1L1Q8NH94 360 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 RNASE8Q8TDE3 154 aaKnown RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 COL25A1Q9BXS0 654 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 PGPEP1LA6NFU8 196 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 IGFBP7Q16270 282 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 CALHM1Q8IU99 346 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 TMEM167BQ9NRX6 74 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 TMEM140Q9NV12 185 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 IGHV3-21A0A0B4J1V1 117 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 RBP4P02753 201 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 TNFAIP6P98066 277 aaPredicted RBP10.32□□□□□ -0.76
ERBB2-201ENST00000269571 FOXC1Q12948 553 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 LRRC10Q5BKY1 277 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 TIMM9Q9Y5J7 89 aa10.32□□□□□ -0.76
ERBB2-201ENST00000269571 A0A1W2PRD5 423 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 A0A1W2PRF3 423 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 A0A1W2PRM7 423 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 ARL14EPLP0DKL9 152 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 COX7A1P24310 79 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 MRPS11P82912 194 aaKnown RBP10.31□□□□□ -0.76
ERBB2-201ENST00000269571 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 C5orf24Q7Z6I8 188 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 OR8A1Q8NGG7 326 aa10.31□□□□□ -0.76
ERBB2-201ENST00000269571 WBP1Q96G27 269 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms