RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 SH3BGRL3Q9H299 93 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 PINLYPA6NC86 204 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 RPL30P62888 115 aaKnown RBP11.88□□□□□ -0.51
CDH3-201ENST00000264012 RIGQ13278 110 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 WBP1Q96G27 269 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 SCNM1Q9BWG6 230 aa11.88□□□□□ -0.51
CDH3-201ENST00000264012 RALYQ9UKM9 306 aaKnown RBP11.88□□□□□ -0.51
CDH3-201ENST00000264012 FREM3P0C091 2139 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 G0S2P27469 103 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 APOBEC3AP31941 199 aaPredicted RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 PTTG1IPP53801 180 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 OR4A5Q8NH83 315 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 RAB24Q969Q5 203 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 QTRT1Q9BXR0 403 aaKnown RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 ZNF430Q9H8G1 570 aaPredicted RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 IGKV1-9A0A0C4DH69 117 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 A8MXK9 166 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 SNURFLB1AK76 121 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 HIST1H1BP16401 226 aaKnown RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 VAMP3Q15836 100 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 FAM201AQ5SY85 155 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 OR5AU1Q8NGC0 362 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 GALNT14Q96FL9 552 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 GUCD1Q96NT3 240 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 M0QZK8 103 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 GGCTO75223 188 aaKnown RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 GFRA1P56159 465 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 PQLC2Q6ZP29 291 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 ZNF383Q8NA42 475 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 VPS25Q9BRG1 176 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 CLEC7AQ9BXN2 247 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 ZNF319Q9P2F9 582 aa11.87□□□□□ -0.51
CDH3-201ENST00000264012 FOXD3Q9UJU5 478 aaPredicted RBP11.87□□□□□ -0.51
CDH3-201ENST00000264012 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 OR10S1Q8NGN2 331 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 PQLC2LA1A4F0 135 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 LIPFP07098 398 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 HIST3H3Q16695 136 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 RPL39P5Q59GN2 51 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 SNRNP40Q96DI7 357 aaKnown RBP11.86□□□□□ -0.51
CDH3-201ENST00000264012 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 LOC105371242A0A075B767 164 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 EIF3GO75821 320 aaKnown RBP eCLIP11.86□□□□□ -0.51
CDH3-201ENST00000264012 CCL1P22362 96 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 RPL29P47914 159 aaKnown RBP11.86□□□□□ -0.51
CDH3-201ENST00000264012 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 ZCCHC14Q8WYQ9 949 aaKnown RBP11.86□□□□□ -0.51
CDH3-201ENST00000264012 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 FBLN5Q9UBX5 448 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 THADAQ6YHU6 1953 aa11.86□□□□□ -0.51
CDH3-201ENST00000264012 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 OR2T8A6NH00 312 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 H0YL77 283 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 DANCRP0C864 163 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 C2orf68Q2NKX9 166 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
CDH3-201ENST00000264012 PLSCR2Q9NRY7 297 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 IQCF6A8MYZ5 107 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 PROB1E7EW31 1015 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 M0R2Z0 102 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 BSPH1Q075Z2 132 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 OR13A1Q8NGR1 328 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 UCP1P25874 307 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 FHITP49789 147 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 LOXL3P58215 753 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 PRNTQ86SH4 94 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 PNKDQ8N490 385 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 KLHDC3Q9BQ90 382 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 TEX50A0A1B0GTY4 177 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 MSGN1A6NI15 193 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 UNQ5815/PRO19632Q6UWF5 114 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 ZIC4Q8N9L1 334 aa11.85□□□□□ -0.51
CDH3-201ENST00000264012 FNDC1Q4ZHG4 1894 aaPredicted RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 PI4KAP42356 2102 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 RND3P61587 244 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 C19orf35Q6ZS72 473 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 SLC25A28Q96A46 364 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 ISLRO14498 428 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 TCAPO15273 167 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 SS18L1O75177 396 aaPredicted RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 WFDC3Q8IUB2 231 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 CLPSP04118 112 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 ATP5J2P56134 94 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 LBHQ53QV2 105 aaPredicted RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 EIF4E3Q8N5X7 224 aaKnown RBP11.84□□□□□ -0.51
CDH3-201ENST00000264012 DCTN5Q9BTE1 182 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 ZNF735P0CB33 412 aa11.84□□□□□ -0.51
CDH3-201ENST00000264012 BTCP35070 178 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms