RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TNFRSF9Q07011 255 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 CT45A1Q5HYN5 189 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 HSD17B13Q7Z5P4 300 aaPredicted RBP7.52□□□□□ -1.21
CKAP2-201ENST00000258607 CT45A3Q8NHU0 189 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 SLC25A17O43808 307 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 THBDP07204 575 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 SULT1A2P50226 295 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 RBPJQ06330 500 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 KLRD1Q13241 179 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF645Q8N7E2 425 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 NRGNQ92686 78 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM140Q9NV12 185 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 MED9Q9NWA0 146 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 TUBD1Q9UJT1 453 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 PRELID3BQ9Y3B1 194 aa7.52□□□□□ -1.21
CKAP2-201ENST00000258607 C7orf77A4D0Y5 90 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 E7EQL1 145 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 DVL1O14640 695 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 OR8U8P0C7N1 319 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MPZP25189 248 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 NBL1P41271 181 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 IL15RAQ13261 267 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MSMO1Q15800 293 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MORN2Q502X0 79 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 HAPLN4Q86UW8 402 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PRELID1Q9Y255 219 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 RNF115Q9Y4L5 304 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 A0A1W2PPV4 95 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MAP1LC3B2A6NCE7 125 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 SRRM5B3KS81 715 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MGST3O14880 152 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 CRYBA1P05813 215 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 SPP1P10451 314 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 SRPXP78539 464 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 NHLRC2Q8NBF2 726 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MAPK1IP1LQ8NDC0 245 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 OR5D13Q8NGL4 314 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 TVP23CQ96ET8 276 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MAP1LC3BQ9GZQ8 125 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.51□□□□□ -1.21
CKAP2-201ENST00000258607 SLC35D1Q9NTN3 355 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 TET2Q6N021 2002 aaPredicted RBP7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PPIAL4EA0A075B759 164 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 LRRC30A6NM36 301 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PRSS44E7EML9 344 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PPIAL4DF5H284 164 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 DNASE2O00115 360 aaPredicted RBP7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PPIAL4FP0DN26 164 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 CNTFRP26992 372 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 CHRNA7P36544 502 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 SULT1A1P50225 295 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 BRWD1-AS2P59051 145 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 HBG1P69891 147 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 HBG2P69892 147 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 NCMAPQ5T1S8 102 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 BTNL8Q6UX41 500 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MUC15Q8N387 334 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 HARBI1Q96MB7 349 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 UHRF2Q96PU4 802 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PCGF1Q9BSM1 259 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 MRPL20Q9BYC9 149 aaKnown RBP7.51□□□□□ -1.21
CKAP2-201ENST00000258607 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 PPIAL4AQ9Y536 164 aa7.51□□□□□ -1.21
CKAP2-201ENST00000258607 TIMM8BQ9Y5J9 83 aaPredicted RBP7.51□□□□□ -1.21
CKAP2-201ENST00000258607 CEACAM18A8MTB9 384 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 NDUFB3O43676 98 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 PAGE4O60829 102 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 IGKV1D-33P01593 117 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 IGKV1-33P01594 117 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 CD3EP07766 207 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ACSM6Q6P461 480 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 SAXO1Q8IYX7 474 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ATP5SQ99766 215 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ATPIF1Q9UII2 106 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 TEP1Q99973 2627 aaKnown RBP7.5□□□□□ -1.21
CKAP2-201ENST00000258607 C17orf100A8MU93 164 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ZNF737O75373 536 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 DFFBO76075 338 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 SNAPINO95295 136 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 IGHV3-23P01764 117 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ID3Q02535 119 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 HFEQ30201 348 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ODF3L1Q8IXM7 274 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 EAF1Q96JC9 268 aaPredicted RBP7.5□□□□□ -1.21
CKAP2-201ENST00000258607 ITPR2Q14571 2701 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 COL27A1Q8IZC6 1860 aaPredicted RBP7.5□□□□□ -1.21
CKAP2-201ENST00000258607 RBFOX3A6NFN3 312 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 TMEM210A6NLX4 147 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 TAAR5O14804 337 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 NQO2P16083 231 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 THBS3P49746 956 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 IGFL2Q6UWQ7 119 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 OR10G4Q8NGN3 311 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 OR10G9Q8NGN4 311 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 OR10G7Q8NGN6 311 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 MISP3Q96FF7 219 aa7.5□□□□□ -1.21
CKAP2-201ENST00000258607 RITA1Q96K30 269 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms