RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 MOGAT3Q86VF5 341 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 Q8N7P7 452 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 SARAFQ96BY9 339 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 HSD17B10Q99714 261 aaKnown RBP21.19■□□□□ 0.98
RAB40C-201ENST00000248139 PLSCR4Q9NRQ2 329 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 RRHO14718 337 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 IFNA10P01566 189 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 IGLV1-44P01699 117 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 ZNF66Q6ZN08 573 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 CYP2G1PQ6ZSU1 146 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 BHLHA15Q7RTS1 189 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-201ENST00000248139 ABHD12Q8N2K0 398 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 GCSAMQ8N6F7 178 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 ZNF383Q8NA42 475 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 PROCRQ9UNN8 238 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 LAMP3Q9UQV4 416 aa21.19■□□□□ 0.98
RAB40C-201ENST00000248139 RIF1Q5UIP0 2472 aaKnown RBP21.18■□□□□ 0.98
RAB40C-201ENST00000248139 TRAV17A0A0B4J275 112 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 IFNL4K9M1U5 179 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 M0R1B8 84 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 OR2V2Q96R30 315 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 ASCL3Q9NQ33 180 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 TMEM242Q9NWH2 141 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 DSCAMO60469 2012 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 PHOX2AO14813 284 aa21.18■□□□□ 0.98
RAB40C-201ENST00000248139 SPTBN2O15020 2390 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 MRPL37Q9BZE1 423 aaKnown RBP21.17■□□□□ 0.98
RAB40C-201ENST00000248139 SEC14L6B5MCN3 397 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 OPN1MWP04001 364 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 OPN1MW2P0DN77 364 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 OPN1MW3P0DN78 364 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 OR4X1Q8NH49 305 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 CIB3Q96Q77 187 aaPredicted RBP21.17■□□□□ 0.98
RAB40C-201ENST00000248139 DERL1Q9BUN8 251 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 PARD6AQ9NPB6 346 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 WASF3Q9UPY6 502 aa21.17■□□□□ 0.98
RAB40C-201ENST00000248139 PGPEP1LA6NFU8 196 aa21.16■□□□□ 0.98
RAB40C-201ENST00000248139 CD1BP29016 333 aa21.16■□□□□ 0.98
RAB40C-201ENST00000248139 ATP5G3P48201 142 aa21.16■□□□□ 0.98
RAB40C-201ENST00000248139 PFN1P07737 140 aaKnown RBP21.16■□□□□ 0.98
RAB40C-201ENST00000248139 CDC34P49427 236 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-201ENST00000248139 PRSS8Q16651 343 aa21.16■□□□□ 0.98
RAB40C-201ENST00000248139 MBNL2Q5VZF2 373 aaKnown RBP21.16■□□□□ 0.98
RAB40C-201ENST00000248139 PCGF1Q9BSM1 259 aa21.16■□□□□ 0.98
RAB40C-201ENST00000248139 HEYLQ9NQ87 328 aaPredicted RBP21.16■□□□□ 0.98
RAB40C-201ENST00000248139 TRBV24-1A0A075B6N3 115 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 A0A1W2PPQ1 181 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 MYOD1P15172 320 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 CST9LP1Q5W188 147 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 C1orf162Q8NEQ5 155 aaPredicted RBP21.15■□□□□ 0.98
RAB40C-201ENST00000248139 DEFB108BQ8NET1 73 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 SRRM5B3KS81 715 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 H7BYZ3 331 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 CGAP01215 116 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 GALR1P47211 349 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 YLPM1P49750 1951 aaKnown RBP21.15■□□□□ 0.98
RAB40C-201ENST00000248139 OR10A7Q8NGE5 316 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 OR4A16Q8NH70 328 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 SLC25A15Q9Y619 301 aa21.15■□□□□ 0.98
RAB40C-201ENST00000248139 C11orf94C9JXX5 98 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 ADH4P08319 380 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 CHRNA7P36544 502 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 GNB2P62879 340 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 HTD2P86397 168 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 OR13D1Q8NGV5 346 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 S100PBPQ96BU1 408 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 TNCP24821 2201 aa21.14■□□□□ 0.98
RAB40C-201ENST00000248139 MBP02144 154 aa21.14■□□□□ 0.97
RAB40C-201ENST00000248139 GYPAP02724 150 aa21.14■□□□□ 0.97
RAB40C-201ENST00000248139 LOXL3P58215 753 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 VWC2Q2TAL6 325 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 ARFGEF3Q5TH69 2177 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 BSNQ9UPA5 3926 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 PCNX1Q96RV3 2341 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 TMEM170AQ8WVE7 144 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 CTDSP1Q9GZU7 261 aa21.13■□□□□ 0.97
RAB40C-201ENST00000248139 FAM90A1Q86YD7 464 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 TGIF2LYQ8IUE0 185 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 ITLN1Q8WWA0 313 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 IFI27L2Q9H2X8 130 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 PIEZO2Q9H5I5 2752 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 TMEM250H0YL14 139 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 MIC13Q5XKP0 118 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 ZNF474Q6S9Z5 364 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-201ENST00000248139 IGFL2Q6UWQ7 119 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 C22orf34Q6ZV56 151 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 SSMEM1Q8WWF3 244 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 WDR83OSQ9Y284 106 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 CD82P27701 267 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 FAM3BP58499 235 aaPredicted RBP21.12■□□□□ 0.97
RAB40C-201ENST00000248139 MS4A5Q9H3V2 200 aa21.12■□□□□ 0.97
RAB40C-201ENST00000248139 LY86O95711 162 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 HPRT1P00492 218 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 P2RY6Q15077 328 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 NEIL1Q96FI4 390 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-201ENST00000248139 ZNRD1Q9P1U0 126 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 ZNF891A8MT65 544 aaPredicted RBP21.11■□□□□ 0.97
RAB40C-201ENST00000248139 C17orf112F2Z3M2 114 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 HNF1AP20823 631 aa21.11■□□□□ 0.97
RAB40C-201ENST00000248139 PMS2P11Q13670 270 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms