RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 FAM216AQ8WUB2 273 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 MANBALQ9NQG1 85 aa17.99■□□□□ 0.47
SH2D3A-201ENST00000245908 HMGB3O15347 200 aaKnown RBP17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 FTH1P19P0C7X4 201 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 GPR12P47775 334 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 RPS16P62249 146 aaKnown RBP17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 SPINK9Q5DT21 86 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 FAM90A1Q86YD7 464 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 OR2Z1Q8NG97 314 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 QTRT1Q9BXR0 403 aaKnown RBP17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 SLC25A15Q9Y619 301 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 IGKV1D-17A0A075B6S4 117 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 C15orf62A8K5M9 175 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 OR9G9P0C7N8 305 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 SFTPCP11686 197 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 TMEM241Q24JQ0 296 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 ZNF709Q8N972 641 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 DOCK11Q5JSL3 2073 aa17.98■□□□□ 0.47
SH2D3A-201ENST00000245908 FAM90A9PA6NNJ1 464 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 PROP1O75360 226 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 GZMHP20718 246 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 ZNF664Q8N3J9 261 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 DEFB124Q8NES8 71 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 C17orf112F2Z3M2 114 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 SNRPCP09234 159 aaKnown RBP17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 LTC4SQ16873 150 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 CR1LQ2VPA4 569 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 SNX22Q96L94 193 aa17.97■□□□□ 0.47
SH2D3A-201ENST00000245908 HPRT1P00492 218 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 CFHR2P36980 270 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 ADIRFQ15847 76 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 MSMPQ1L6U9 139 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 MORN2Q502X0 79 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 OR6C3Q9NZP0 311 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 INTS1Q8N201 2190 aaKnown RBP17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 MGST3O14880 152 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 CASP6P55212 293 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 DIRC2Q96SL1 478 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 GNG12Q9UBI6 72 aa17.96■□□□□ 0.47
SH2D3A-201ENST00000245908 SPAARA0A1B0GVQ0 90 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 YPEL1O60688 119 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 FCGR3BO75015 233 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 Q8N7P7 452 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 PPP1R35Q8TAP8 253 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 GATAD1Q8WUU5 269 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 RPUSD4Q96CM3 377 aaKnown RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 YPEL2Q96QA6 119 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 PARLQ9H300 379 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 MBD3L4A6NDZ8 208 aaPredicted RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 MBD3L3A6NE82 208 aaPredicted RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 MBD3L5A6NJ08 208 aaPredicted RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 RPL23P62829 140 aaKnown RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 BSXQ3C1V8 233 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 SEM1Q6ZVN7 128 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 LRP11Q86VZ4 500 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 GCSAMQ8N6F7 178 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 MBD3L2Q8NHZ7 208 aaPredicted RBP17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 DUSP13Q9UII6 198 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 WDR83OSQ9Y284 106 aa17.95■□□□□ 0.46
SH2D3A-201ENST00000245908 AMBPP02760 352 aa17.94■□□□□ 0.46
SH2D3A-201ENST00000245908 ACOT6Q3I5F7 207 aaPredicted RBP17.94■□□□□ 0.46
SH2D3A-201ENST00000245908 C4orf17Q53FE4 359 aa17.94■□□□□ 0.46
SH2D3A-201ENST00000245908 C16orf82Q7Z2V1 217 aa17.94■□□□□ 0.46
SH2D3A-201ENST00000245908 HEATR1Q9H583 2144 aaKnown RBP17.94■□□□□ 0.46
SH2D3A-201ENST00000245908 F2RL2O00254 374 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 RBFOX2O43251 390 aaKnown RBP eCLIP17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 GCGP01275 180 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 OR4F5Q8NH21 305 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 Q8TCH9 128 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 OR4F4Q96R69 305 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 PFN1P07737 140 aaKnown RBP17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 RAB4AP20338 218 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 CDC34P49427 236 aaPredicted RBP17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 LOXL3P58215 753 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 DEFB109BQ30KR1 87 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 PRAMEF5Q5TYX0 476 aa17.93■□□□□ 0.46
SH2D3A-201ENST00000245908 M0R1X1 148 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 CEACAM4O75871 244 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 CD1BP29016 333 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 TLE1Q04724 770 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 COA6Q5JTJ3 125 aaKnown RBP17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 OR52E5Q8NH55 327 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 PLPPR2Q96GM1 343 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 PYGO2Q9BRQ0 406 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 HCFC1P51610 2035 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 IGHV3OR15-7A0A075B7D8 119 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 EREGO14944 169 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 PAGE4O60829 102 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 IGHV3-13P01766 116 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 PDLIM3Q53GG5 364 aaPredicted RBP17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 OR4A16Q8NH70 328 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 NEIL1Q96FI4 390 aaPredicted RBP17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 IFI27L2Q9H2X8 130 aa17.92■□□□□ 0.46
SH2D3A-201ENST00000245908 PRRC2CQ9Y520 2896 aaKnown RBP17.91■□□□□ 0.46
SH2D3A-201ENST00000245908 ZNF83P51522 516 aa17.91■□□□□ 0.46
SH2D3A-201ENST00000245908 RPP30P78346 268 aaKnown RBP17.91■□□□□ 0.46
SH2D3A-201ENST00000245908 OR1P1Q8NH06 330 aa17.91■□□□□ 0.46
SH2D3A-201ENST00000245908 OR2V2Q96R30 315 aa17.91■□□□□ 0.46
SH2D3A-201ENST00000245908 PARD6AQ9NPB6 346 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms