RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 K7ERU9 68 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 DUX1O43812 170 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 RPL15P61313 204 aaKnown RBP12.7□□□□□ -0.38
HOXC12-201ENST00000243103 GMPPAQ96IJ6 420 aaPredicted RBP12.7□□□□□ -0.38
HOXC12-201ENST00000243103 ABCA4P78363 2273 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 IGHV3-43A0A0B4J1X8 118 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 FRG2CA6NGY1 282 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 GPX1P07203 203 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 WNT2P09544 360 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 OR10J4P0C629 311 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 ARL14EPLP0DKL9 152 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 IGHV3-43DP0DP04 118 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 CCL4P13236 92 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 SPATA46Q5T0L3 261 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 SLC23A3Q6PIS1 610 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 MMD2Q8IY49 270 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 GCNT2Q8N0V5 402 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 KIR3DL3Q8N743 410 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 OR52L2PQ8NGH6 319 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 ORAOV1Q8WV07 137 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 INTS1Q8N201 2190 aaKnown RBP12.7□□□□□ -0.38
HOXC12-201ENST00000243103 BMPR1BO00238 502 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 TNFSF11O14788 317 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 IGLL1P15814 213 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 F2RP25116 425 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 ZNF137PP52743 207 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 PAFAH1B2P68402 229 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 C3AR1Q16581 482 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 GJC3Q8NFK1 279 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 OR10P1Q8NGE3 313 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 NUDT16L1Q9BRJ7 211 aaKnown RBP12.7□□□□□ -0.38
HOXC12-201ENST00000243103 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
HOXC12-201ENST00000243103 MED13Q9UHV7 2174 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 TOX4O94842 621 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 CRYABP02511 175 aaKnown RBP12.69□□□□□ -0.38
HOXC12-201ENST00000243103 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
HOXC12-201ENST00000243103 ZNF138P52744 262 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 TRAT1Q6PIZ9 186 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 LHFPL4Q7Z7J7 247 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 QTRT1Q9BXR0 403 aaKnown RBP12.69□□□□□ -0.38
HOXC12-201ENST00000243103 LIPT2A6NK58 231 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 TIMP3P35625 211 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 MIC13Q5XKP0 118 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 TPRX1Q8N7U7 411 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 SLC45A2Q9UMX9 530 aa12.69□□□□□ -0.38
HOXC12-201ENST00000243103 CTXND1A0A1B0GTU2 59 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 PDLIM4P50479 330 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 RPL31P62899 125 aaKnown RBP12.68□□□□□ -0.38
HOXC12-201ENST00000243103 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
HOXC12-201ENST00000243103 MUC15Q8N387 334 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 CORO2AQ92828 525 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 SPTSSAQ969W0 71 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 P2RX4Q99571 388 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 ZNF835Q9Y2P0 537 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 MRPS21P82921 87 aaKnown RBP12.68□□□□□ -0.38
HOXC12-201ENST00000243103 LRRC75BQ2VPJ9 315 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 NMSQ5H8A3 153 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 CRIP3Q6Q6R5 217 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 C20orf204Q6ZNR8 217 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 VKORC1L1Q8N0U8 176 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 PLXNB1O43157 2135 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 A0A1B0GX78 115 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 A0A1W2PS18 150 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 RAMP3O60896 148 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 MT-CO3P00414 261 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 TRAPPC2LQ9UL33 140 aa12.68□□□□□ -0.38
HOXC12-201ENST00000243103 C5orf49A4QMS7 147 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 GAGE10A6NGK3 116 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 RNF212BA8MTL3 300 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 OR7C2O60412 319 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 CELA3BP08861 270 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
HOXC12-201ENST00000243103 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 PLXDC1Q8IUK5 500 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 RAB40CQ96S21 281 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 AGMATQ9BSE5 352 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 M0R1X1 148 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 CA2P00918 260 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 HS3ST3A1Q9Y663 406 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 K7EMI3 77 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 IGKV3-11P04433 115 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 CCL7P80098 99 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 PSG9Q00887 426 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
HOXC12-201ENST00000243103 CSMD1Q96PZ7 3565 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 SVEP1Q4LDE5 3571 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 TSPAN2O60636 221 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 ZNF32P17041 273 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 GRB2P62993 217 aaKnown RBP12.66□□□□□ -0.38
HOXC12-201ENST00000243103 SPATA31B1PQ5VZV4 182 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 CXorf67Q86X51 503 aaPredicted RBP12.66□□□□□ -0.38
HOXC12-201ENST00000243103 NEUROG1Q92886 237 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 OBP2AQ9NY56 170 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 COL6A6A6NMZ7 2263 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
HOXC12-201ENST00000243103 SYNGR1O43759 233 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms