RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KLK15Q9H2R5 256 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 MCUBQ9NWR8 336 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 RDH8Q9NYR8 311 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 SCP2D1Q9UJQ7 156 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 RBM7Q9Y580 266 aaKnown RBP10.71□□□□□ -0.69
DDX39A-201ENST00000242776 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.69
DDX39A-201ENST00000242776 GAPDHP04406 335 aaKnown RBP10.7□□□□□ -0.7
DDX39A-201ENST00000242776 IL3RAP26951 378 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 FCGR2CP31995 323 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 HAPLN4Q86UW8 402 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 OR2T10Q8NGZ9 312 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 GIMAP1Q8WWP7 306 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 PRRT1Q99946 306 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF2Q9BSG1 426 aaPredicted RBP10.7□□□□□ -0.7
DDX39A-201ENST00000242776 OR2W1Q9Y3N9 320 aa10.7□□□□□ -0.7
DDX39A-201ENST00000242776 OVOL1O14753 267 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 IGHG4P01861 327 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 OR8U8P0C7N1 319 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 NFYAP23511 347 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-201ENST00000242776 INSL3P51460 131 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 SLURP1P55000 103 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 F2RL1P55085 397 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 DEFA1P59665 94 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 DEFA3P59666 94 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 CFHR3Q02985 330 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF616Q08AN1 781 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 SCGB2B2Q4G0G5 96 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 TMEM65Q6PI78 240 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 DHRS11Q6UWP2 260 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 SLC25A48Q6ZT89 311 aaKnown RBP10.69□□□□□ -0.7
DDX39A-201ENST00000242776 LINC00311Q8N616 119 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 S1PR3Q99500 378 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 GHITMQ9H3K2 345 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 HRASLSQ9HDD0 168 aa10.69□□□□□ -0.7
DDX39A-201ENST00000242776 LINC00854A0A1B0GVQ3 168 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 G3V318 75 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 LYRM1O43325 122 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 TUSC2O75896 110 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 PPYP01298 95 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 PSMB8P28062 276 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 EBI3Q14213 229 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 FAAP20Q6NZ36 180 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF429Q86V71 674 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 Q8N6K4 173 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 OR4D10Q8NGI6 311 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 PLSCR3Q9NRY6 295 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 SLC2A8Q9NY64 477 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 SLC22A5O76082 557 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 AADACP22760 399 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 FXYD4P59646 89 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF816Q0VGE8 651 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ASAH1Q13510 395 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF660Q6AZW8 331 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF491Q8N8L2 437 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 DLX4Q92988 240 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-201ENST00000242776 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 C11orf54Q9H0W9 315 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-201ENST00000242776 PIPOXQ9P0Z9 390 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF221Q9UK13 617 aa10.68□□□□□ -0.7
DDX39A-201ENST00000242776 I3L521 148 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 RAB29O14966 203 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 MOSP00540 346 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF735P0CB33 412 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 CT45A1Q5HYN5 189 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 LHFPL1Q86WI0 220 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 OR51S1Q8NGJ8 323 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 TERB2Q8NHR7 220 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 CT45A3Q8NHU0 189 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 CASTOR1Q8WTX7 329 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 SECTM1Q8WVN6 248 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 ARPC1AQ92747 370 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 SCGB3A2Q96PL1 93 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 TM2D3Q9BRN9 247 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 FXYD6Q9H0Q3 95 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 OR2D2Q9H210 308 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 EDA2RQ9HAV5 297 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
DDX39A-201ENST00000242776 SLC31A2O15432 143 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 OR8U9P0C7N5 309 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 IGHV4-30-4P0DP06 118 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 PGAM2P15259 253 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 S100GP29377 79 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF134P52741 427 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 KIAA0141Q14154 515 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-201ENST00000242776 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
DDX39A-201ENST00000242776 MSMO1Q15800 293 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 FAM71F2Q6NXP2 309 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 IDO2Q6ZQW0 420 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-201ENST00000242776 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-201ENST00000242776 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 SLC5A7Q9GZV3 580 aa10.66□□□□□ -0.7
DDX39A-201ENST00000242776 PARP12Q9H0J9 701 aaKnown RBP10.66□□□□□ -0.7
DDX39A-201ENST00000242776 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms