RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TMPRSS3P57727 454 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 ERVK-16P61578 105 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 RAB11AP62491 216 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 HEPN1Q6WQI6 88 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 C1orf229Q6ZS94 237 aaPredicted RBP13.34□□□□□ -0.27
UBE3D-201ENST00000237186 Q8NA96 180 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF439Q8NDP4 499 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 MSRB2Q9Y3D2 182 aa13.34□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.27
UBE3D-201ENST00000237186 C17orf112F2Z3M2 114 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 CYB5R3P00387 301 aaPredicted RBP13.33□□□□□ -0.27
UBE3D-201ENST00000237186 TCF23Q7RTU1 214 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 Q8N7P7 452 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 ZNF709Q8N972 641 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 OR10G9Q8NGN4 311 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 OR10G7Q8NGN6 311 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 OR4S2Q8NH73 311 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 ADTRPQ96IZ2 230 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 TMEM242Q9NWH2 141 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 WDR83OSQ9Y284 106 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 TP53TG5Q9Y2B4 290 aa13.33□□□□□ -0.27
UBE3D-201ENST00000237186 hCG_1809904A0A1W2PP81 198 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 A0A1W2PR64 198 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 A0A1W2PRV1 198 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 THBS3P49746 956 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 OR2B8PP59922 312 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 SPINK9Q5DT21 86 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 UTF1Q5T230 341 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 ACTR3CQ9C0K3 210 aaPredicted RBP13.33□□□□□ -0.28
UBE3D-201ENST00000237186 IDI2-AS1Q9NZ38 188 aa13.33□□□□□ -0.28
UBE3D-201ENST00000237186 TRGV8A0A0C4DH27 118 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 DPRXA6NFQ7 191 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 IRF2P14316 349 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 CD1BP29016 333 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 TFF3Q07654 80 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 POU2AF1Q16633 256 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 TMEM249Q2WGJ8 235 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 FFAR4Q5NUL3 377 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 ADAM5Q6NVV9 412 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 DUX4L9Q6RFH8 374 aaPredicted RBP13.32□□□□□ -0.28
UBE3D-201ENST00000237186 CISD2Q8N5K1 135 aaKnown RBP13.32□□□□□ -0.28
UBE3D-201ENST00000237186 CCL13Q99616 98 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 SDF2L1Q9HCN8 221 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 MGAQ8IWI9 3026 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 BSNQ9UPA5 3926 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 CEP295Q9C0D2 2601 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 ACACAQ13085 2346 aa13.32□□□□□ -0.28
UBE3D-201ENST00000237186 SAA2-SAA4A0A096LPE2 208 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 C17orf100A8MU93 164 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 PRSS46E5RG02 174 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 SAA2P0DJI9 122 aaPredicted RBP13.31□□□□□ -0.28
UBE3D-201ENST00000237186 MRPS11P82912 194 aaKnown RBP13.31□□□□□ -0.28
UBE3D-201ENST00000237186 SSX9Q7RTT3 188 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 BOD1L1Q8NFC6 3051 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 C15orf61A6NNL5 157 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 ZNF727A8MUV8 499 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 K7ENP7 123 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 CYB5BO43169 146 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 MPDU1O75352 247 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 IGHV3-7P01780 117 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 GYPAP02724 150 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 THBDP07204 575 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 CD81P60033 236 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 SNRPEP62304 92 aaKnown RBP13.31□□□□□ -0.28
UBE3D-201ENST00000237186 ELOBQ15370 118 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 ADIPOQQ15848 244 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 VKORC1L1Q8N0U8 176 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 DEFB108BQ8NET1 73 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 OR10A7Q8NGE5 316 aa13.31□□□□□ -0.28
UBE3D-201ENST00000237186 TRAV3A0A0B4J244 114 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 SEC14L6B5MCN3 397 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 TMEM250H0YL14 139 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 UBE2CO00762 179 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 IL6RP08887 468 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 OR4A8P0C604 315 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 RPL35P42766 123 aaKnown RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 MEF2BQ02080 365 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 TLE1Q04724 770 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 TBR1Q16650 682 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 ACOT6Q3I5F7 207 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 WDR25Q64LD2 544 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 GFRALQ6UXV0 394 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 FAM216BQ8N7L0 139 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 ZNF383Q8NA42 475 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 HEYLQ9NQ87 328 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 MANBALQ9NQG1 85 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 RPUSD1Q9UJJ7 312 aaKnown RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 TCF19Q9Y242 345 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 FOXA2Q9Y261 457 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 LINC00312Q9Y6C7 94 aa13.3□□□□□ -0.28
UBE3D-201ENST00000237186 ANKRD11Q6UB99 2663 aaPredicted RBP13.3□□□□□ -0.28
UBE3D-201ENST00000237186 hADV38S2A0JD32 116 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 IFNA10P01566 189 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 IGHV2-5P01817 119 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 S100A6P06703 90 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 AKR1D1P51857 326 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 RND2P52198 227 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms