RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 FGFRL1Q8N441 504 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 RND1Q92730 232 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 Q9UFV3 132 aa17.17■□□□□ 0.34
SNX3-201ENST00000230085 TMEM210A6NLX4 147 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 CNN1P51911 297 aaKnown RBP17.16■□□□□ 0.34
SNX3-201ENST00000230085 ELLP55199 621 aaPredicted RBP17.16■□□□□ 0.34
SNX3-201ENST00000230085 ERVK11-1P61568 191 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 ADORA2A-AS1P86434 159 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 DRAM1Q8N682 238 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 OR10G9Q8NGN4 311 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 OR10G7Q8NGN6 311 aa17.16■□□□□ 0.34
SNX3-201ENST00000230085 UBR5O95071 2799 aaPredicted RBP17.16■□□□□ 0.34
SNX3-201ENST00000230085 FLNCQ14315 2725 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 TRAV9-1A0A075B6T8 112 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 C5orf49A4QMS7 147 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 IDH3GP51553 393 aaPredicted RBP17.15■□□□□ 0.34
SNX3-201ENST00000230085 ERVFC1-1P60608 527 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 ERVS71-1P61550 626 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 BATF2Q8N1L9 274 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 RPUSD4Q96CM3 377 aaKnown RBP17.15■□□□□ 0.34
SNX3-201ENST00000230085 HSPB6O14558 160 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 TCAPO15273 167 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 GNB2P62879 340 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 PAX5Q02548 391 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 AARDQ4LEZ3 155 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 BTNL3Q6UXE8 466 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 MCEMP1Q8IX19 187 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 TUSC5Q8IXB3 177 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 WDR31Q8NA23 367 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 RDH5Q92781 318 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.15■□□□□ 0.34
SNX3-201ENST00000230085 PPP1R14DQ9NXH3 145 aa17.15■□□□□ 0.34
SNX3-201ENST00000230085 LRRC30A6NM36 301 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 F6UZH7 168 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 ZG16O60844 167 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 UBE2NP61088 152 aaKnown RBP17.14■□□□□ 0.33
SNX3-201ENST00000230085 SRSF1Q07955 248 aaKnown RBP eCLIP17.14■□□□□ 0.33
SNX3-201ENST00000230085 ZNF146Q15072 292 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 ZNF645Q8N7E2 425 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 OR4F5Q8NH21 305 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 GMPPAQ96IJ6 420 aaPredicted RBP17.14■□□□□ 0.33
SNX3-201ENST00000230085 OR4F4Q96R69 305 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 ELOVL1Q9BW60 279 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 PXMP4Q9Y6I8 212 aa17.14■□□□□ 0.33
SNX3-201ENST00000230085 A0A1W2PPQ1 181 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 C17orf112F2Z3M2 114 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 HS3ST1O14792 307 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 ESDP10768 282 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 KIR2DL2P43627 348 aaPredicted RBP17.13■□□□□ 0.33
SNX3-201ENST00000230085 GUSBP1Q15486 140 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 TGIF2LXQ8IUE1 241 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 C17orf78Q8N4C9 275 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 CNEP1R1Q8N9A8 125 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 R3HDM4Q96D70 268 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 NPCDR1Q9BY65 106 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 KCNIP2Q9NS61 270 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 PPP1R3CQ9UQK1 317 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 FUT9Q9Y231 359 aa17.13■□□□□ 0.33
SNX3-201ENST00000230085 TNFSF13O75888 250 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 CLDN1O95832 211 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 YPEL3P61236 119 aaPredicted RBP17.12■□□□□ 0.33
SNX3-201ENST00000230085 LINC01551Q86U37 167 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 SLC25A22Q9H936 323 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 FREM1Q5H8C1 2179 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 M0QZK8 103 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 RAB29O14966 203 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 RAB4AP20338 218 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 BMP5P22003 454 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 IL3RAP26951 378 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 PLP2Q04941 152 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 FFAR4Q5NUL3 377 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 VWA1Q6PCB0 445 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 FAM214BQ7L5A3 538 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 OR10P1Q8NGE3 313 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 GP6Q9HCN6 339 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 KCNIP1Q9NZI2 227 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 POLDIP2Q9Y2S7 368 aa17.12■□□□□ 0.33
SNX3-201ENST00000230085 ADGRG4Q8IZF6 3080 aa17.11■□□□□ 0.33
SNX3-201ENST00000230085 BTF3P20290 206 aaKnown RBP17.11■□□□□ 0.33
SNX3-201ENST00000230085 SELENOTP62341 195 aa17.11■□□□□ 0.33
SNX3-201ENST00000230085 CDSNQ15517 529 aa17.11■□□□□ 0.33
SNX3-201ENST00000230085 FAM216AQ8WUB2 273 aa17.11■□□□□ 0.33
SNX3-201ENST00000230085 HELZ2Q9BYK8 2649 aaKnown RBP17.11■□□□□ 0.33
SNX3-201ENST00000230085 A0A1B0GWJ7 208 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 M0R143 59 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 MPDU1O75352 247 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 CLDN14O95500 239 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 NGFP01138 241 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 OR10J1P30954 320 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 PPP1CBP62140 327 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 NUFIP2Q7Z417 695 aaKnown RBP17.1■□□□□ 0.33
SNX3-201ENST00000230085 Q8N7P7 452 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 NECAP1Q8NC96 275 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 IL1F10Q8WWZ1 152 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 TMEM37Q8WXS4 190 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 STARD4Q96DR4 205 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 FKBP11Q9NYL4 201 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 ZNF503-AS2A6NEH8 195 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 FAM90A9PA6NNJ1 464 aa17.1■□□□□ 0.33
SNX3-201ENST00000230085 AGFG2O95081 481 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms