RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 ST8SIA5O15466 376 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 MDKP21741 143 aaPredicted RBP18.42■□□□□ 0.54
CCDC9-201ENST00000221922 FGF7P21781 194 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 OR10G9Q8NGN4 311 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 OR10G7Q8NGN6 311 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 OR10D4PQ8NGN7 298 aa18.42■□□□□ 0.54
CCDC9-201ENST00000221922 ZG16O60844 167 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 PFN1P07737 140 aaKnown RBP18.41■□□□□ 0.54
CCDC9-201ENST00000221922 DNLZQ5SXM8 178 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 MOGAT3Q86VF5 341 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 DOLPP1Q86YN1 238 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 Q8NA96 180 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 DCTN5Q9BTE1 182 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 SLC25A22Q9H936 323 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 MANBALQ9NQG1 85 aa18.41■□□□□ 0.54
CCDC9-201ENST00000221922 GPR12P47775 334 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 SELENOVP59797 346 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 ADIRFQ15847 76 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 GNG12Q9UBI6 72 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 MGAQ8IWI9 3026 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 BOD1L1Q8NFC6 3051 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 ZNF729A6NN14 1252 aaPredicted RBP18.4■□□□□ 0.54
CCDC9-201ENST00000221922 LINC00473A8K010 186 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 DEFB108AA8MXU0 73 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 YPEL1O60688 119 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 BMP5P22003 454 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 GNB2P62879 340 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 FAM27E3Q08E93 113 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 FFAR4Q5NUL3 377 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 VHLLQ6RSH7 139 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 OR10A7Q8NGE5 316 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 YPEL2Q96QA6 119 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 SCNM1Q9BWG6 230 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 NPCDR1Q9BY65 106 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 ACTR3CQ9C0K3 210 aaPredicted RBP18.4■□□□□ 0.54
CCDC9-201ENST00000221922 NCOR1P1Q9H4R4 102 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 RAB9BQ9NP90 201 aa18.4■□□□□ 0.54
CCDC9-201ENST00000221922 LHBP01229 141 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 PLA2G5P39877 138 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 GATA4P43694 442 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 RPL23P62829 140 aaKnown RBP18.39■□□□□ 0.53
CCDC9-201ENST00000221922 TBR1Q16650 682 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 BSXQ3C1V8 233 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 C16orf82Q7Z2V1 217 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 ZDHHC16Q969W1 377 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 SRD5A3Q9H8P0 318 aa18.39■□□□□ 0.53
CCDC9-201ENST00000221922 ZMAT5Q9UDW3 170 aaKnown RBP18.39■□□□□ 0.53
CCDC9-201ENST00000221922 K7ENP7 123 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 SPRY3O43610 288 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 TFF3Q07654 80 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 HNF4GQ14541 408 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 MORN2Q502X0 79 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 CISD2Q8N5K1 135 aaKnown RBP18.38■□□□□ 0.53
CCDC9-201ENST00000221922 ZNF383Q8NA42 475 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 ITLN1Q8WWA0 313 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 OR6C3Q9NZP0 311 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 DOCK11Q5JSL3 2073 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 IGHV3OR15-7A0A075B7D8 119 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 F2RL2O00254 374 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 HMGB3O15347 200 aaKnown RBP18.38■□□□□ 0.53
CCDC9-201ENST00000221922 CDPF1Q6NVV7 123 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 PARLQ9H300 379 aa18.38■□□□□ 0.53
CCDC9-201ENST00000221922 CADP27708 2225 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 TRBV23-1A0A0A0MS06 115 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 A0A0G2JNJ9 132 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 CCKARP32238 428 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 DUTP33316 252 aaKnown RBP18.37■□□□□ 0.53
CCDC9-201ENST00000221922 LTC4SQ16873 150 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 C4orf17Q53FE4 359 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 RAB24Q969Q5 203 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 RPUSD4Q96CM3 377 aaKnown RBP18.37■□□□□ 0.53
CCDC9-201ENST00000221922 Q9UFV3 132 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 PITPNC1Q9UKF7 332 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 MARCH11A6NNE9 402 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 RBMXL2O75526 392 aaKnown RBP18.37■□□□□ 0.53
CCDC9-201ENST00000221922 LY86O95711 162 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 HIST1H1BP16401 226 aaKnown RBP18.37■□□□□ 0.53
CCDC9-201ENST00000221922 PDZD11Q5EBL8 140 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 TGIF2LYQ8IUE0 185 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 ZNF709Q8N972 641 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 OR51G1Q8NGK1 321 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 OR4X1Q8NH49 305 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 ELOVL5Q9NYP7 299 aa18.37■□□□□ 0.53
CCDC9-201ENST00000221922 APC2O95996 2303 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 FAM90A9PA6NNJ1 464 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 CD40P25942 277 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 AARDQ4LEZ3 155 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 GATAD1Q8WUU5 269 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 R3HDM4Q96D70 268 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 DIRC2Q96SL1 478 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 ZNF835Q9Y2P0 537 aa18.36■□□□□ 0.53
CCDC9-201ENST00000221922 GATCO43716 136 aaKnown RBP18.35■□□□□ 0.53
CCDC9-201ENST00000221922 NHLH1Q02575 133 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 SPRNQ5BIV9 151 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 GFRALQ6UXV0 394 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 C22orf34Q6ZV56 151 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 OR4F5Q8NH21 305 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 FAM222BQ8WU58 562 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 OR4F4Q96R69 305 aa18.35■□□□□ 0.53
CCDC9-201ENST00000221922 PRDM13Q9H4Q3 707 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms