RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 ACSF3Q4G176 576 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 A0A0U1RQV5 110 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 GGTLC3B5MD39 225 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 CRYBB3P26998 211 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 WNT2BQ93097 391 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 ELOVL5Q9NYP7 299 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 TNFSF18Q9UNG2 199 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 IGHV3-66A0A0C4DH42 116 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 ATXN7O15265 892 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 TMEM155Q4W5P6 130 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 WDR82Q6UXN9 313 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 MIC13Q5XKP0 118 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 MAFAQ8NHW3 353 aaPredicted RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PPIAL4EA0A075B759 164 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PPIAL4DF5H284 164 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PPIAL4FP0DN26 164 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 TRIP6Q15654 476 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 FAM71F2Q6NXP2 309 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 UNQ9370/PRO34162Q6UXP9 181 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 OR51G1Q8NGK1 321 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PPIAL4AQ9Y536 164 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 TMEM229AB2RXF0 380 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 TRA2AQ13595 282 aaKnown RBP eCLIP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 DDX60LQ5H9U9 1706 aaKnown RBP12.66□□□□□ -0.38
SPTLC2-201ENST00000216484 CBLN1P23435 193 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 H3BTX0 84 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 MRAPQ8TCY5 172 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 SIGMAR1Q99720 223 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 ARHGAP32A7KAX9 2087 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 RND2P52198 227 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 C16orf97H3BN30 126 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 ISG15P05161 165 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 RNF182Q8N6D2 247 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 COX6B1P14854 86 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 TPRX1Q8N7U7 411 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 TUBD1Q9UJT1 453 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 PEX7O00628 323 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 SUMO4Q6EEV6 95 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 CST9LQ9H4G1 147 aa12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 ZNF430Q9H8G1 570 aaPredicted RBP12.65□□□□□ -0.38
SPTLC2-201ENST00000216484 LRP6O75581 1613 aa12.65□□□□□ -0.39
SPTLC2-201ENST00000216484 ATP5LO75964 103 aa12.65□□□□□ -0.39
SPTLC2-201ENST00000216484 NRAPQ86VF7 1730 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 C2CD4DB7Z1M9 353 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 LRP10Q7Z4F1 713 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 PIMREGQ9BSJ6 248 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 PRR14LQ5THK1 2151 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 HSPB1P04792 205 aaKnown RBP12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 RNASE4P34096 147 aaKnown RBP12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 TTC9CQ8N5M4 171 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 CCL13Q99616 98 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 RPL32P62910 135 aaKnown RBP12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 CT55Q8WUE5 264 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 LOC390937A0A1W2PQ73 354 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 NPPCP23582 126 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 FAM209AQ5JX71 171 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 ZFAND6Q6FIF0 208 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 ZNF488Q96MN9 340 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 ASAH2BP0C7U1 165 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 PRSS53Q2L4Q9 553 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 EEF1AKMT3Q96AZ1 226 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 ZNF107Q9UII5 783 aaPredicted RBP12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 PSME4Q14997 1843 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 NKX2-2O95096 273 aa12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 CXorf66Q5JRM2 361 aaPredicted RBP12.64□□□□□ -0.39
SPTLC2-201ENST00000216484 H0Y980 276 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 ZIC3O60481 467 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 S100A7L2Q5SY68 101 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 CDC42EP2O14613 210 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 C1QL1O75973 258 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 ZNF658BQ4V348 819 aaPredicted RBP12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 WDR54Q9H977 334 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 PROB1E7EW31 1015 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 SH3BGRL3Q9H299 93 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 KLK8O60259 260 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 HMGA1P17096 107 aaKnown RBP12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 TRAV30A0A087WSZ9 112 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 NPIPB4C9JG80 1138 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 TMEM42Q69YG0 159 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 LINC00305Q7Z4B0 112 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 CXCL16Q9H2A7 254 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 TRGV2A0A075B6R0 118 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 MUC21Q5SSG8 566 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 DMRT1Q9Y5R6 373 aa12.63□□□□□ -0.39
SPTLC2-201ENST00000216484 APOHP02749 345 aaPredicted RBP12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 GLULP15104 373 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CBLN3Q6UW01 205 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 SPEM1Q8N4L4 309 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 CLDND2Q8NHS1 167 aa12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 SSBP3Q9BWW4 388 aaPredicted RBP12.62□□□□□ -0.39
SPTLC2-201ENST00000216484 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms