RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CLMNQ96JQ2 1002 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 DEFB129Q9H1M3 183 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 R3HDMLQ9H3Y0 253 aa14.44□□□□□ -0.1
CPNE3-210ENST00000621245 TBC1D8O95759 1140 aa14.43□□□□□ -0.1
CPNE3-210ENST00000621245 USP44Q9H0E7 712 aa14.43□□□□□ -0.1
CPNE3-210ENST00000621245 VEZTQ9HBM0 779 aa14.43□□□□□ -0.1
CPNE3-210ENST00000621245 ANGEL1Q9UNK9 670 aaKnown RBP14.43□□□□□ -0.1
CPNE3-210ENST00000621245 PTPRCP08575 1304 aa14.42□□□□□ -0.1
CPNE3-210ENST00000621245 FKBP1AP62942 108 aaKnown RBP14.42□□□□□ -0.1
CPNE3-210ENST00000621245 UBE4AQ14139 1066 aa14.42□□□□□ -0.1
CPNE3-210ENST00000621245 MFSD14BQ5SR56 506 aa14.42□□□□□ -0.1
CPNE3-210ENST00000621245 LDLRAD1Q5T700 205 aa14.42□□□□□ -0.1
CPNE3-210ENST00000621245 NBPF12Q5TAG4 269 aaPredicted RBP14.42□□□□□ -0.1
CPNE3-210ENST00000621245 ZSWIM8A7E2V4 1837 aa14.41□□□□□ -0.1
CPNE3-210ENST00000621245 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
CPNE3-210ENST00000621245 HIBADHP31937 336 aaKnown RBP14.41□□□□□ -0.1
CPNE3-210ENST00000621245 RFX5P48382 616 aaPredicted RBP14.41□□□□□ -0.1
CPNE3-210ENST00000621245 TRMT2AQ8IZ69 625 aaKnown RBP14.41□□□□□ -0.1
CPNE3-210ENST00000621245 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
CPNE3-210ENST00000621245 NF2P35240 595 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 GJA5P36382 358 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 MMP14P50281 582 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 RBM5P52756 815 aaKnown RBP eCLIP14.4□□□□□ -0.1
CPNE3-210ENST00000621245 CHAF1AQ13111 956 aaPredicted RBP14.4□□□□□ -0.1
CPNE3-210ENST00000621245 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 SPRYD7Q5W111 196 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 FBXO33Q7Z6M2 555 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 TDRD3Q9H7E2 651 aaKnown RBP14.4□□□□□ -0.1
CPNE3-210ENST00000621245 SMC4Q9NTJ3 1288 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 TTF2Q9UNY4 1162 aaKnown RBP14.4□□□□□ -0.1
CPNE3-210ENST00000621245 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
CPNE3-210ENST00000621245 TM4SF4P48230 202 aa14.39□□□□□ -0.11
CPNE3-210ENST00000621245 BCAMP50895 628 aa14.39□□□□□ -0.11
CPNE3-210ENST00000621245 RASA3Q14644 834 aa14.39□□□□□ -0.11
CPNE3-210ENST00000621245 ARMC9Q7Z3E5 817 aa14.39□□□□□ -0.11
CPNE3-210ENST00000621245 ZNF296Q8WUU4 475 aaPredicted RBP14.39□□□□□ -0.11
CPNE3-210ENST00000621245 PDE4DIPQ5VU43 2346 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 GTPBP6O43824 516 aaPredicted RBP14.38□□□□□ -0.11
CPNE3-210ENST00000621245 PDE8BO95263 885 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 FGFR2P21802 821 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 CRKP46108 304 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 RGS19P49795 217 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 CACNB3P54284 484 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 SOX10P56693 466 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 WNK4Q96J92 1243 aa14.38□□□□□ -0.11
CPNE3-210ENST00000621245 ZNF70Q9UC06 446 aaPredicted RBP14.38□□□□□ -0.11
CPNE3-210ENST00000621245 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 MYH2Q9UKX2 1941 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 IGF2BP3O00425 579 aaKnown RBP eCLIP14.37□□□□□ -0.11
CPNE3-210ENST00000621245 USP2O75604 605 aaPredicted RBP14.37□□□□□ -0.11
CPNE3-210ENST00000621245 MAP3K11Q16584 847 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 ATG9AQ7Z3C6 839 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 CTU1Q7Z7A3 348 aaKnown RBP14.37□□□□□ -0.11
CPNE3-210ENST00000621245 DZIP1LQ8IYY4 767 aaKnown RBP14.37□□□□□ -0.11
CPNE3-210ENST00000621245 TEPSINQ96N21 525 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 TNNQ9UQP3 1299 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
CPNE3-210ENST00000621245 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
CPNE3-210ENST00000621245 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
CPNE3-210ENST00000621245 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
CPNE3-210ENST00000621245 SERPINA10Q9UK55 444 aa14.36□□□□□ -0.11
CPNE3-210ENST00000621245 NOB1Q9ULX3 412 aaKnown RBP14.36□□□□□ -0.11
CPNE3-210ENST00000621245 DOCK2Q92608 1830 aa14.36□□□□□ -0.11
CPNE3-210ENST00000621245 GPR25O00155 361 aa14.35□□□□□ -0.11
CPNE3-210ENST00000621245 STK25O00506 426 aa14.35□□□□□ -0.11
CPNE3-210ENST00000621245 MYO1BO43795 1136 aa14.35□□□□□ -0.11
CPNE3-210ENST00000621245 CAP1Q01518 475 aa14.35□□□□□ -0.11
CPNE3-210ENST00000621245 SIL1Q9H173 461 aa14.35□□□□□ -0.11
CPNE3-210ENST00000621245 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
CPNE3-210ENST00000621245 EYA2O00167 538 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 CHRM1P11229 460 aaPredicted RBP14.34□□□□□ -0.11
CPNE3-210ENST00000621245 MLLT1Q03111 559 aaPredicted RBP14.34□□□□□ -0.11
CPNE3-210ENST00000621245 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 PUM3Q15397 648 aaKnown RBP14.34□□□□□ -0.11
CPNE3-210ENST00000621245 VPS37DQ86XT2 251 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 SLC10A4Q96EP9 437 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 MEIS3Q99687 375 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 ELP3Q9H9T3 547 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 HPS5Q9UPZ3 1129 aa14.34□□□□□ -0.11
CPNE3-210ENST00000621245 LRRFIP2Q9Y608 721 aaKnown RBP14.34□□□□□ -0.11
CPNE3-210ENST00000621245 PPP1R12BO60237 982 aaPredicted RBP14.33□□□□□ -0.12
CPNE3-210ENST00000621245 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.33□□□□□ -0.12
CPNE3-210ENST00000621245 IFNL1Q8IU54 200 aa14.33□□□□□ -0.12
CPNE3-210ENST00000621245 PTPN18Q99952 460 aa14.33□□□□□ -0.12
CPNE3-210ENST00000621245 MYO5AQ9Y4I1 1855 aaKnown RBP14.32□□□□□ -0.12
CPNE3-210ENST00000621245 UBTFL1P0CB47 393 aaPredicted RBP14.32□□□□□ -0.12
CPNE3-210ENST00000621245 ADORA1P30542 326 aa14.32□□□□□ -0.12
CPNE3-210ENST00000621245 SUPT20HL1Q3ZLR7 823 aa14.32□□□□□ -0.12
CPNE3-210ENST00000621245 CAVIN4Q5BKX8 364 aa14.32□□□□□ -0.12
CPNE3-210ENST00000621245 APOBEC3HQ6NTF7 200 aaKnown RBP14.32□□□□□ -0.12
CPNE3-210ENST00000621245 CFHR5Q9BXR6 569 aa14.32□□□□□ -0.12
CPNE3-210ENST00000621245 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
CPNE3-210ENST00000621245 MANSC4A6NHS7 340 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-210ENST00000621245 FRAT2O75474 233 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-210ENST00000621245 ZBTB48P10074 688 aaPredicted RBP14.31□□□□□ -0.12
CPNE3-210ENST00000621245 RARSP54136 660 aaKnown RBP14.31□□□□□ -0.12
CPNE3-210ENST00000621245 VGLL4Q14135 290 aa14.31□□□□□ -0.12
CPNE3-210ENST00000621245 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms