RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SATB2Q9UPW6 733 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 BMP2KLQ5H9B9 411 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 LGSNQ5TDP6 509 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 CKAP2LQ8IYA6 745 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 EVI5O60447 810 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 SYKP43405 635 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 DMWDQ09019 674 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 PDCD7Q8N8D1 485 aaKnown RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 DRC3Q9H069 523 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 TBCAO75347 108 aaKnown RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 RUFY3Q7L099 469 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 ARMC9Q7Z3E5 817 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 RGS22Q8NE09 1264 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 TTF2Q9UNY4 1162 aaKnown RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 TMEM265A0A087WTH1 108 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 DNA2P51530 1060 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC42Q96M95 316 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 SETDB2Q96T68 719 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 HIP1RO75146 1068 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 RNF8O76064 485 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 SSTR3P32745 418 aaPredicted RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 TTF1Q15361 905 aaPredicted RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 PPP2R5EQ16537 467 aa8.05□□□□□ -1.12
COLCA1-205ENST00000620864 TRMT112Q9UI30 125 aaKnown RBP8.05□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA8QA0A0J9YX86 632 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 LRRD1A4D1F6 860 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA8OA6NCC3 632 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA8NF8WBI6 632 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC65Q8IXS2 484 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 TBC1D2Q9BYX2 928 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 ZSCAN22P10073 491 aaPredicted RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 MLLT1Q03111 559 aaPredicted RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 RILPL1Q5EBL4 403 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SEL1L2Q5TEA6 688 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 TCERG1LQ5VWI1 586 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 TMTC2Q8N394 836 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 UBA5Q9GZZ9 404 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 NAPBQ9H115 298 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SLAIN2Q9P270 581 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 PARP2Q9UGN5 583 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 FAM169AQ9Y6X4 670 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 DAPK1P53355 1430 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 I3L4J1 428 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 INF2Q27J81 1249 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 ZNF354CQ86Y25 554 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SYCP3Q8IZU3 236 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 EVI5LQ96CN4 794 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 TAF12Q16514 161 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 DUSP27Q5VZP5 1158 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SPTY2D1Q68D10 685 aaPredicted RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SNX21Q969T3 373 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 CABS1Q96KC9 395 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 HAUS2Q9NVX0 235 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 FAF1Q9UNN5 650 aaPredicted RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 UTP11Q9Y3A2 253 aaKnown RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SUPT6HQ7KZ85 1726 aaKnown RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 GNAT3A8MTJ3 354 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 IDH1O75874 414 aaKnown RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 UTP14AQ9BVJ6 771 aaKnown RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 IMPACTQ9P2X3 320 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 PFDN1O60925 122 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 SLMAPQ14BN4 828 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 PPP1R7Q15435 360 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 MUM1Q2TAK8 710 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 NME9Q86XW9 330 aa8.04□□□□□ -1.12
COLCA1-205ENST00000620864 TRPC5Q9UL62 973 aaPredicted RBP8.04□□□□□ -1.12
COLCA1-205ENST00000620864 PPP2R3AQ06190 1150 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 MAP3K12Q12852 859 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 PDE1CQ14123 709 aaPredicted RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 MRPS27Q92552 414 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ARMCX6Q7L4S7 300 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 IMPG2Q9BZV3 1241 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ZNF213O14771 459 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ZNF131P52739 623 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ARHGEF2Q92974 986 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 GOLGA8BA8MQT2 603 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 GJB2P29033 226 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ANO6Q4KMQ2 910 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 VSIG1Q86XK7 387 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC170Q8IYT3 715 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 TBC1D31Q96DN5 1066 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ARL1P40616 181 aaPredicted RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 IARSP41252 1262 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 EIF6P56537 245 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 MYRIPQ8NFW9 859 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 EIF4G3O43432 1585 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ZC3H15Q8WU90 426 aaKnown RBP8.03□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC68Q9H2F9 335 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 ZSWIM4Q9H7M6 989 aa8.03□□□□□ -1.12
COLCA1-205ENST00000620864 RIMS2Q9UQ26 1411 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 RNF40O75150 1001 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 CCDC186Q7Z3E2 898 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 FERMT3Q86UX7 667 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 IFNL2Q8IZJ0 200 aa8.02□□□□□ -1.12
COLCA1-205ENST00000620864 CACYBPQ9HB71 228 aaKnown RBP8.02□□□□□ -1.12
COLCA1-205ENST00000620864 CCNL1Q9UK58 526 aaPredicted RBP8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms