RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
SNCA-212ENST00000611107 NBPF12Q5TAG4 269 aaPredicted RBP10.76□□□□□ -0.69
SNCA-212ENST00000611107 RASAL3Q86YV0 1011 aa10.76□□□□□ -0.69
SNCA-212ENST00000611107 SSH3Q8TE77 659 aa10.76□□□□□ -0.69
SNCA-212ENST00000611107 ZNF70Q9UC06 446 aaPredicted RBP10.76□□□□□ -0.69
SNCA-212ENST00000611107 DDX19BQ9UMR2 479 aa10.76□□□□□ -0.69
SNCA-212ENST00000611107 DOCK2Q92608 1830 aa10.76□□□□□ -0.69
SNCA-212ENST00000611107 A0A1B0GUL7 405 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 LBX1P52954 281 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 RASGRF1Q13972 1273 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 DIXDC1Q155Q3 683 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 CAVIN4Q5BKX8 364 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 CCDC102BQ68D86 513 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 APOBEC3HQ6NTF7 200 aaKnown RBP10.75□□□□□ -0.69
SNCA-212ENST00000611107 RGMBQ6NW40 437 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 VPS37DQ86XT2 251 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 SIRT2Q8IXJ6 389 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 C2orf69Q8N8R5 385 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 XAGE2Q96GT9 111 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 HHIPL1Q96JK4 782 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 CLMNQ96JQ2 1002 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 TEPSINQ96N21 525 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 DEFB129Q9H1M3 183 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 MAST2Q6P0Q8 1798 aa10.75□□□□□ -0.69
SNCA-212ENST00000611107 TCP10L2B9ZVM9 353 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 SLC10A3P09131 477 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 SLURP2P0DP57 97 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 ZNF157P51786 506 aaPredicted RBP10.74□□□□□ -0.69
SNCA-212ENST00000611107 RBM5P52756 815 aaKnown RBP eCLIP10.74□□□□□ -0.69
SNCA-212ENST00000611107 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
SNCA-212ENST00000611107 RASA3Q14644 834 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 CEP85Q6P2H3 762 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 VEZTQ9HBM0 779 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 ZBTB40Q9NUA8 1239 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
SNCA-212ENST00000611107 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
SNCA-212ENST00000611107 FRAT2O75474 233 aaPredicted RBP10.73□□□□□ -0.69
SNCA-212ENST00000611107 GJA5P36382 358 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 MKRN3Q13064 507 aaKnown RBP10.73□□□□□ -0.69
SNCA-212ENST00000611107 TBC1D9Q6ZT07 1266 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 APOBEC3FQ8IUX4 373 aaKnown RBP10.73□□□□□ -0.69
SNCA-212ENST00000611107 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 DBNDD2Q9BQY9 259 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.73□□□□□ -0.69
SNCA-212ENST00000611107 SERPINA10Q9UK55 444 aa10.73□□□□□ -0.69
SNCA-212ENST00000611107 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
SNCA-212ENST00000611107 USP2O75604 605 aaPredicted RBP10.72□□□□□ -0.69
SNCA-212ENST00000611107 MAP2K2P36507 400 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 ECE1P42892 770 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 NFIAQ12857 509 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 LDLRAD1Q5T700 205 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 ZFPM1Q8IX07 1006 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 HMG20BQ9P0W2 317 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 ANGEL1Q9UNK9 670 aaKnown RBP10.72□□□□□ -0.69
SNCA-212ENST00000611107 HDAC5Q9UQL6 1122 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 DAGLAQ9Y4D2 1042 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 LAMB1P07942 1786 aa10.72□□□□□ -0.69
SNCA-212ENST00000611107 MCAMP43121 646 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 CDC42EP5Q6NZY7 148 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 CNKSR2Q8WXI2 1034 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 ZDHHC15Q96MV8 337 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 NEUROD6Q96NK8 337 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 R3HDMLQ9H3Y0 253 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 EXOC6BQ9Y2D4 811 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 NOP58Q9Y2X3 529 aaKnown RBP10.71□□□□□ -0.69
SNCA-212ENST00000611107 NDUFB9Q9Y6M9 179 aa10.71□□□□□ -0.69
SNCA-212ENST00000611107 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 SURF6O75683 361 aaKnown RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 CTCFP49711 727 aaPredicted RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 MMP14P50281 582 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 MAP2K1Q02750 393 aaPredicted RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 G3BP1Q13283 466 aaKnown RBP eCLIP10.7□□□□□ -0.7
SNCA-212ENST00000611107 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 MAP3K11Q16584 847 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 TNNI3KQ59H18 835 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 WDR66Q8TBY9 1149 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 TBC1D22AQ8WUA7 517 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 TEKT1Q969V4 418 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 EAF2Q96CJ1 260 aaPredicted RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 CCDC8Q9H0W5 538 aaPredicted RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 FAM198AQ9UFP1 575 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 DBNLQ9UJU6 430 aaKnown RBP10.7□□□□□ -0.7
SNCA-212ENST00000611107 FPGT-TNNI3KV9GXZ4 949 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 FOCADQ5VW36 1801 aa10.7□□□□□ -0.7
SNCA-212ENST00000611107 RFX7Q2KHR2 1363 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 ZBTB22O15209 634 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 ARID4AP29374 1257 aaPredicted RBP10.69□□□□□ -0.7
SNCA-212ENST00000611107 FKBP1BP68106 108 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 HDLBPQ00341 1268 aaKnown RBP10.69□□□□□ -0.7
SNCA-212ENST00000611107 NOGQ13253 232 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 IFFO2Q5TF58 517 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 HHIPL2Q6UWX4 724 aa10.69□□□□□ -0.7
SNCA-212ENST00000611107 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.69□□□□□ -0.7
SNCA-212ENST00000611107 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms