RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 APPP05067 770 aa23.32■■□□□ 1.32
MMP28-201ENST00000605424 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
MMP28-201ENST00000605424 GNL3LQ9NVN8 582 aaKnown RBP23.32■■□□□ 1.32
MMP28-201ENST00000605424 BTAF1O14981 1849 aa23.32■■□□□ 1.32
MMP28-201ENST00000605424 BCAMP50895 628 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 ANTXR2P58335 489 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 UVSSAQ2YD98 709 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 MAGEB6Q8N7X4 407 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 ZNF804BA4D1E1 1349 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 PNPLA7Q6ZV29 1317 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 LEO1Q8WVC0 666 aaPredicted RBP23.31■■□□□ 1.32
MMP28-201ENST00000605424 BCL2L12Q9HB09 334 aa23.31■■□□□ 1.32
MMP28-201ENST00000605424 NAP1L2Q9ULW6 460 aaPredicted RBP23.31■■□□□ 1.32
MMP28-201ENST00000605424 GTF2E1P29083 439 aaPredicted RBP23.3■■□□□ 1.32
MMP28-201ENST00000605424 HS1BP3Q53T59 392 aa23.3■■□□□ 1.32
MMP28-201ENST00000605424 NBPF3Q9H094 633 aa23.3■■□□□ 1.32
MMP28-201ENST00000605424 GOLGA6L4A6NEF3 574 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 SNAP23O00161 211 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 TBC1D9BQ66K14 1250 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 FAM173BQ6P4H8 233 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 TMEM87BQ96K49 555 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 SETDB2Q96T68 719 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 NCOA5Q9HCD5 579 aaKnown RBP23.29■■□□□ 1.32
MMP28-201ENST00000605424 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 ZPR1O75312 459 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 IFNL3Q8IZI9 196 aa23.29■■□□□ 1.32
MMP28-201ENST00000605424 ANGEL1Q9UNK9 670 aaKnown RBP23.29■■□□□ 1.32
MMP28-201ENST00000605424 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
MMP28-201ENST00000605424 CARMIL3Q8ND23 1372 aa23.28■■□□□ 1.32
MMP28-201ENST00000605424 MBD4O95243 580 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 TBC1D10CQ8IV04 446 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 NACAP1Q9BZK3 213 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 NAPBQ9H115 298 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 CNNM2Q9H8M5 875 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 TFIP11Q9UBB9 837 aaKnown RBP23.27■■□□□ 1.32
MMP28-201ENST00000605424 CCNL1Q9UK58 526 aaPredicted RBP23.27■■□□□ 1.32
MMP28-201ENST00000605424 HPS5Q9UPZ3 1129 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 RTCBQ9Y3I0 505 aaKnown RBP23.27■■□□□ 1.32
MMP28-201ENST00000605424 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 GOLGA8BA8MQT2 603 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 CAVIN4Q5BKX8 364 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 NLRP3Q96P20 1036 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 RRAGDQ9NQL2 400 aaPredicted RBP23.27■■□□□ 1.32
MMP28-201ENST00000605424 LRP2BPQ9P2M1 347 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 MINPP1Q9UNW1 487 aa23.27■■□□□ 1.32
MMP28-201ENST00000605424 ESPNB1AK53 854 aa23.26■■□□□ 1.31
MMP28-201ENST00000605424 ZNF396Q96N95 335 aaPredicted RBP23.26■■□□□ 1.31
MMP28-201ENST00000605424 GPHNQ9NQX3 736 aaPredicted RBP23.26■■□□□ 1.31
MMP28-201ENST00000605424 SBF2Q86WG5 1849 aa23.26■■□□□ 1.31
MMP28-201ENST00000605424 CASZ1Q86V15 1759 aa23.26■■□□□ 1.31
MMP28-201ENST00000605424 FDPSP14324 419 aaKnown RBP23.25■■□□□ 1.31
MMP28-201ENST00000605424 TPTE2Q6XPS3 522 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 C3orf67Q6ZVT6 689 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 DDX19AQ9NUU7 478 aaKnown RBP23.25■■□□□ 1.31
MMP28-201ENST00000605424 GSG1L2A8MUP6 293 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 SH2B2O14492 632 aaPredicted RBP23.25■■□□□ 1.31
MMP28-201ENST00000605424 SEMA3EO15041 775 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 GNPATO15228 680 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 KCNQ4P56696 695 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 FUCA2Q9BTY2 467 aa23.25■■□□□ 1.31
MMP28-201ENST00000605424 LY75O60449 1722 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 TIAM2Q8IVF5 1701 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 MYH15Q9Y2K3 1946 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 CPLX1O14810 134 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 ADD1P35611 737 aaKnown RBP23.24■■□□□ 1.31
MMP28-201ENST00000605424 BICDL1Q6ZP65 573 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 NBPF5PQ86XG9 351 aaPredicted RBP23.24■■□□□ 1.31
MMP28-201ENST00000605424 MTA3Q9BTC8 594 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 KRT23Q9C075 422 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 ARMT1Q9H993 441 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 EPB41L4AQ9HCS5 686 aaPredicted RBP23.24■■□□□ 1.31
MMP28-201ENST00000605424 RCOR1Q9UKL0 485 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 DENND2AQ9ULE3 1009 aa23.24■■□□□ 1.31
MMP28-201ENST00000605424 ZBTB22O15209 634 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 CLCN1P35523 988 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 RPS8P62241 208 aaKnown RBP23.23■■□□□ 1.31
MMP28-201ENST00000605424 RNF214Q8ND24 703 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 ANKRD2Q9GZV1 360 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 NUP62CLQ9H1M0 184 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 COL4A1P02462 1669 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 CDKL5O76039 1030 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 CYB5R4Q7L1T6 521 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 SGMS1Q86VZ5 419 aa23.23■■□□□ 1.31
MMP28-201ENST00000605424 PDS5AQ29RF7 1337 aaKnown RBP23.22■■□□□ 1.31
MMP28-201ENST00000605424 LIFRP42702 1097 aa23.22■■□□□ 1.31
MMP28-201ENST00000605424 AKNAD1Q5T1N1 836 aa23.22■■□□□ 1.31
MMP28-201ENST00000605424 CPLX2Q6PUV4 134 aaKnown RBP23.22■■□□□ 1.31
MMP28-201ENST00000605424 TMED8Q6PL24 325 aaPredicted RBP23.21■■□□□ 1.31
MMP28-201ENST00000605424 IGDCC4Q8TDY8 1250 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 CELF1Q92879 486 aaKnown RBP23.21■■□□□ 1.31
MMP28-201ENST00000605424 ORC3Q9UBD5 711 aaPredicted RBP23.21■■□□□ 1.31
MMP28-201ENST00000605424 SRP68Q9UHB9 627 aaKnown RBP23.21■■□□□ 1.31
MMP28-201ENST00000605424 SLC4A4Q9Y6R1 1079 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 TAF1LQ8IZX4 1826 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 B4E1Z4 1266 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 CCDC192P0DO97 292 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 LIG1P18858 919 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 MAP3K11Q16584 847 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 GIMAP6Q6P9H5 292 aa23.21■■□□□ 1.31
MMP28-201ENST00000605424 FAM196AQ6ZSG2 479 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms